Micrococcus sp. HOU01: SOY78_11345
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Entry
SOY78_11345 CDS
T10249
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
micu Micrococcus sp. HOU01
Pathway
micu03030
DNA replication
micu03430
Mismatch repair
micu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
micu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SOY78_11345
03430 Mismatch repair
SOY78_11345
03440 Homologous recombination
SOY78_11345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
micu03032
]
SOY78_11345
03400 DNA repair and recombination proteins [BR:
micu03400
]
SOY78_11345
Enzymes [BR:
micu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SOY78_11345
DNA replication proteins [BR:
micu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SOY78_11345
DNA repair and recombination proteins [BR:
micu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SOY78_11345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_30
AAA_14
Rad17
AAA_19
zf-CXXC
Mg_chelatase
AAA_18
AAA_2
AAA_28
nSTAND3
Mis12
Motif
Other DBs
NCBI-ProteinID:
WRQ43561
LinkDB
All DBs
Position
2471648..2475133
Genome browser
AA seq
1161 aa
AA seq
DB search
MSTALYRRYRPDRFEDVIGQDHVTVPLRTALAKDRVNHAYLFSGPRGCGKTTSARILARC
LNCAQGPTPTPCGECDSCRDLATGGPGSLDVLEIDAASHGGVEDARGLRERATFAPVRDR
YKILIIDEAHMVTAAGFNALLKIVEEPPEHLKFIFATTEPEKVIGTIRSRTHHYPFRLVP
PEPLIAYLEQLCAEEGVSVEKGVLPLVVRAGTGSVRDTLSVLDQLIAGAQEGQVSYELAV
SLLGFTPEALLDDVIDAVAADDTPTVFRVVDRVVQSGQDPRRFVEDLLDRFRDLVIARAL
PEEAGAILHGMPEDQVRRLSAQAAQLSRAELSRLADITNLALTDMVGATSPRLHLELLMA
RLLLPASDETHRGLAARLEALERRLELGGAAPIEDGASEGTTTPARSGTPAADGGGSAEN
AEGSSTLTGAALARAAMRRPEEPAPTASTAPPERWTPPAPQSAAEAPEGDAAAGATGSER
PQQAPQPKRPEPAEVGARSGDTRRPEAGSRPEPEGRPEPEGRSQAQERTGAAPAPAHGPE
ETAAPSGPTPAPAASQVEMIRRAWPDILTALEDASRLVWMLVKDNASVAGYDGSLLTIGF
QQDGPRQSLLGRGGDRVLGEAVHQVLGIRPRLDLILGGDAPTGDARAQSSARPAGPARTD
RPERPAPQQGRPDRPTAQPNRPAPAPGQAPREPESSRPTPPRSAAPSTAEDDPAPPAVPP
RATQQRQTPEPSPAWTPAAPATSWGPAPTSSTTPAPAPPADGWGGPDEEPPAWDDAPPPE
EDPWDSLPAFDPDAEQDDSDGPEGWTPPARDAEERPVGAAGWDGPVPSVEDWGAPPQAAP
APGGAAPDAGQDSPVQPDAPTPGESEPSAEEVRRAYDPGPLVREEEHSIPVFARPEAELR
AEFAKRFGATRPAGFDDGAGAAADGDSARPATPSPAPDDDAAATERRDLHPAASGAGPSS
DEQRRPTGAPTADETPDPGVPADDADATPRAAAGPGGADFPGSGHPASMYPRLMERLRAG
GPLEPPVNAGSSGGGGTGGGPGAPGGPAPDASPGSPAGGRPSAASLGARPADVEPAGGAS
APPSLDARAAAIRAAREAAQGRGLTRPADTGPAALATSGVGWEDEVVSDDDVPLEDSGLV
GRAVVERVLGGRLLEERPNDA
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgccctgtaccgccgctaccgcccggaccgtttcgaggacgtgatcgggcag
gaccatgtcacggtgccgctgcgcaccgcactggcgaaggaccgcgtgaaccacgcctac
ctcttctccggcccgcgcggctgcggcaagaccacgtccgcccgcatcctcgcgcgctgc
ctgaactgcgcccagggccccacgcccacgccgtgcggcgagtgcgactcgtgccgggac
ctggccaccggcgggccgggctcgctggacgtgctggagatcgacgcggcctcgcacggc
ggtgtggaggacgcccgcggcctgcgcgagcgggccacgttcgccccggtccgggaccgc
tacaagatcctcatcatcgacgaggcgcacatggtcaccgcggcgggcttcaacgcgctg
ctcaagatcgtggaggagccgccggagcacctgaagttcatcttcgccaccacggagccg
gagaaggtcatcgggaccatccgctcccgcacccatcactacccgttccggctcgtgccg
ccggagccgctcatcgcctacctcgagcagctgtgcgcggaggagggcgtgtccgtggag
aagggcgtgctgccgctcgtggtgcgcgccggcacgggctcggtgcgtgacacgctctcc
gtgctggaccagctgatcgcgggtgcccaggagggccaggtctcctacgagctcgcggtg
agcctgctcggcttcaccccggaagccctgctggacgacgtgatcgacgccgtcgccgcg
gacgacacccccaccgtgttccgcgtggtggaccgcgtggtgcagtccggccaggacccg
cgccgcttcgtcgaggacctgctggaccgcttccgcgacctcgtgatcgcgcgtgccctg
ccggaggaggccggggcgatcctgcacggcatgccggaggaccaggtgcggcgtctctcc
gcgcaggccgcgcagctctcccgcgcggagctctcccgcctcgcggacatcaccaacctc
gcgctgacggacatggtgggggccaccagtccccgcctgcacctcgagctgctcatggcg
cgcctgctgctgcccgcctcggacgagacgcaccgcggcctggccgcccgcctcgaggcc
ctcgaacggcgcctcgagctcggtggcgccgcgcccatcgaggacggcgcctccgagggc
acgacgacgccggcccggtccggcacgcccgccgcggacggcggcggatcggccgagaac
gcggagggctccagcactctgaccggtgccgcgctcgcccgggccgccatgcggcggccg
gaggagcccgcgccgaccgcgtccaccgccccgccggagcgctggacgccgcctgccccg
cagtccgcggcagaggcgccggagggggacgccgccgccggggccacggggtccgagcgt
ccgcagcaggcgccgcagcccaagcggcccgaaccggctgaggtcggggcccgttccggg
gacacgcgccgcccggaggccgggagccgccccgagcctgagggccggcccgagcccgag
ggccggtcccaggcccaggagcgcaccggtgccgcgccggcccccgcccacgggccggag
gagacggccgcgccgtcgggccccacgcccgccccggcggcgagccaggtggagatgatc
cgccgggcctggccggacatcctcacggccctcgaggacgcctcacgcctggtgtggatg
ctggtgaaggacaacgcgagcgtcgcgggctacgacggctcgttgctgacgatcggcttc
cagcaggacgggccccgccagtcgctgctcggccggggcggcgaccgcgtgctcggcgag
gccgtccaccaggtgctcggcatccgcccgcggctcgacctgatcctcggtggggacgcg
ccgaccggggacgcccgcgcacagtccagcgctcgcccggccggcccggcgcggacggac
cggcctgagcgtccggccccgcagcagggccggcccgaccgaccgacggcgcagccgaac
cggcccgctccggcaccggggcaggccccgcgcgagccggagtcctcccgccccaccccg
ccgcgctccgccgcaccctccaccgcggaggacgatccggcgccgccggccgttccgccc
cgggccacgcagcagcgtcagacgccggagccgtcccccgcctggacgcccgcggctccc
gccacctcctgggggccggcgccgacgtcgtcgacgacgcccgcccccgccccgccggcg
gacggctggggcggcccggatgaggagccgcccgcctgggacgacgctcccccgcccgag
gaggacccgtgggactcgctgcccgcgttcgacccggacgcggagcaggacgactcggac
ggccccgagggctggaccccgccggcccgcgacgccgaggagcggcccgtcggcgccgcc
ggctgggacggccccgtgccgtcggtcgaggactggggcgcgccgccgcaggccgcaccg
gcccccggcggcgccgcgccggacgccggccaggactccccggtccagcccgacgccccg
acccccggcgagagcgagccgagcgccgaggaggtccgtcgggcctacgacccggggccg
ctggtccgcgaggaggagcactcgatccccgtgttcgcccgtccggaggcggagctgcgc
gccgagttcgcgaagcgcttcggcgcgacccgtcccgccggcttcgacgacggcgcgggc
gcggccgcggacggtgactccgcccggcctgccacgccgtcacccgccccggatgacgac
gcagcggccacggagcgacgcgatctccacccggccgcctcgggcgccggcccgtcctcg
gacgagcagcggcgccccacgggcgcgcccacggccgacgagacccccgatccgggcgtg
cccgccgacgacgcggacgccacgccgcgtgcggctgccggcccgggcggggcggacttc
ccgggttcgggccatccggcgagcatgtacccgcggctcatggagcggctgcgggccggt
gggcccctcgagcctccggtgaacgcgggctcgagcggcggcggcgggacgggcggcggc
cccggcgctcccggtggccccgccccggacgcctcgccgggctcccccgccgggggccgg
ccgagcgcggcctcgctcggggcgcgccccgccgacgtcgagcctgccgggggagcctcg
gcgccgccgtcgttggacgcgcgggccgcggccatccgcgccgcccgcgaggccgcccag
ggccgcggcctgacccggcccgccgacaccggccccgccgccctggcgacgtccggggtg
gggtgggaggacgaggtcgtcagcgacgacgacgtcccgctcgaggactcgggcctcgtg
ggccgggccgtcgtcgaacgggtgctcggcggccgtctgctcgaggaacgccccaacgac
gcctga
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