Microbulbifer sp. YPW1: HUW35_01775
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Entry
HUW35_01775 CDS
T10374
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
micy Microbulbifer sp. YPW1
Pathway
micy00521
Streptomycin biosynthesis
micy00523
Polyketide sugar unit biosynthesis
micy00525
Acarbose and validamycin biosynthesis
micy00541
Biosynthesis of various nucleotide sugars
micy01100
Metabolic pathways
micy01110
Biosynthesis of secondary metabolites
micy01250
Biosynthesis of nucleotide sugars
Module
micy_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
micy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
HUW35_01775 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HUW35_01775 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
HUW35_01775 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HUW35_01775 (rfbB)
00525 Acarbose and validamycin biosynthesis
HUW35_01775 (rfbB)
Enzymes [BR:
micy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
HUW35_01775 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
adh_short
Motif
Other DBs
NCBI-ProteinID:
QKX15832
UniProt:
A0A7H8PV72
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Position
complement(398350..399432)
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AA seq
360 aa
AA seq
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MSNLLVTGGAGFIGANFVHYWMKTYPQDKVVVLDALTYAGNKANLDPVAENPNFVFSHGN
ICDTALVETLLKEHHIDTLVHFAAESHVDRSITGPDAFIETNIIGTHSLLKAVKKVWLDE
GLNKDSHRFHHVSTDEVYGTLGPNDPAFSETTPYAPNSPYSASKAASDHLVRAYHHTYGL
NVTTSNCSNNYGPYHFPEKLIPLVITNILHDKPLPIYGDGQQIRDWLYVEDHARGIELVV
KSGRLGECYNIGGINEWANIDIVKLICKLMNQAFSQNPLLSQRFPLATKAQQGCSEDLIT
YVTDRAGHDRRYAIDPTKSRIELVYEPNVNFESGIRKTVSWYLENENWWREIQDGSYQSE
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacctgctagtaaccggcggtgccggctttatcggcgccaattttgtccattac
tggatgaaaacttacccgcaagacaaggtggtcgtactggatgcactcacctatgccggt
aacaaagctaacctggatccggtggcagaaaatccgaactttgtcttcagccacggcaac
atctgtgataccgcactggtagaaacgctgctcaaagagcatcacatcgatacgctggtg
cattttgctgcggagagccatgtagaccgctccattaccgggccggatgcatttatcgaa
accaatatcatcggtacccacagtctgctcaaggctgtaaagaaagtctggttggatgag
ggactcaataaagatagccaccgcttccaccatgtctcaaccgatgaggtatacggcaca
ttgggtccgaatgatccggccttcagtgagaccacaccctacgcgccaaacagcccatat
tccgcgagcaaggcggcatcggatcacttggtgcgtgcttaccaccacacttatgggctg
aatgtcaccaccagcaattgttcaaataactacgggccttaccacttcccggaaaaactg
attccgctcgtgattaccaatatcctgcacgacaaaccgctgccgatttatggtgatggc
cagcagattcgcgattggctgtacgtagaagaccatgcacgcggaattgaacttgtggta
aagagcgggcgcttgggcgaatgctataacattggcggcattaatgagtgggccaatatc
gatatcgttaaactgatctgtaaacttatgaatcaagcattttcccagaaccccctattg
tctcaacgatttccattggcaaccaaagctcaacaaggttgctcagaggatctgattacc
tatgttactgatcgcgctggccatgatcggcgttatgcgattgatcccacaaagagccgc
attgagctggtatatgagccgaatgtgaacttcgaaagtggcattcgaaaaacggtgtct
tggtacctggaaaatgagaattggtggcgtgaaatacaggatggcagttaccaatctgaa
taa
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