Microbulbifer sp. YPW1: HUW35_03950
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Entry
HUW35_03950 CDS
T10374
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
micy Microbulbifer sp. YPW1
Brite
KEGG Orthology (KO) [BR:
micy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
micy01002
]
HUW35_03950
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
micy01011
]
HUW35_03950
Peptidases and inhibitors [BR:
micy01002
]
Cysteine peptidases
Family C82
HUW35_03950
Peptidoglycan biosynthesis and degradation proteins [BR:
micy01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HUW35_03950
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QKX16205
UniProt:
A0A7H8PWJ2
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Position
929961..931925
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AA seq
654 aa
AA seq
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MSYFIPERRKRKSPLPLIFLGSLCVFALYYAFTANQKTVPVLPENAVRPHLVNWLEDNPD
AWPAQDPIFNPVAVRRIYRRTDYRLLWFDNYSLSDTANDLLKQLTASSSGNPSSMVDYRY
HLGYFDRTLRDTPQRLQMAAVLDVLLTDAFISYAQDTQLDKLNPSAPKHQPRLRRKDITP
VNLTEGGFMMASTRSYPADARQYAANDNGRQYFRGYNRGSQNTQTVDRSRYYTQRRGTAQ
QRGNAYSSGSRYGTSHSARYSTRSYPQTYPRAMPRFRNLQDEGSGLTPSHGEGLFIEENT
PFGSDAQALREQLARYRNMAASGRWRPLPAGPAMTIGAKHNNVVYLRNMLAVYGDYYGYG
DMNSKKFDQSLHQAVVRFQIRHGLKPDGIVGKQTRERLNISPTARAHIIEANIRRREKLP
ANLGDRFIQVNVPGYRLNYVEHDRIKLSMNVVVGKKIHQTPEINTRVARVVFNPTWTVPR
SILVNEILPKARANPHGMENMGYRVVNGSGEYLPLSSQNLKRAAAGGFLMRQKGGEQNIL
GRIKFEIPNSDDIYLHDTRAKSLFGLTDRDYSHGCVRLAKPRQLAEVLLRDEPGDWSRYR
IEQLTTGDETTEVRMSKNVKVYLTYWTAWVDGEGRMHFRPDIYGKDGLAVNQFN
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatttcattccagagcgtcgcaaacgcaagtcaccgctgccgttgatttttctc
ggtagcctgtgtgtgtttgccctctattacgcattcactgccaatcagaaaacggtgccg
gtattaccggagaacgccgtgcggccgcatctggtgaactggctggaggataaccccgac
gcctggcccgcgcaggatccgattttcaatccggtggcagtgcgccgcatctaccggcgc
acggactacagactgctgtggtttgataactacagcctgagcgataccgccaacgatctg
ctcaagcagctcaccgcttcgagttccggcaacccgagcagcatggtggactaccgctat
cacctgggttatttcgatcgcaccctgcgcgacacaccacagcgcctgcaaatggccgcg
gtgctcgacgtactgctcaccgatgcgtttatttcctatgcccaggatacgcagctcgac
aagctcaatcccagcgcacccaagcaccagccgcgactgcgtcgcaaggacatcaccccg
gtcaacctcaccgagggcgggttcatgatggccagtacccgcagctaccccgctgatgcg
cgccagtatgctgccaacgacaacggtcgccagtacttccgcggctacaatcgcggcagc
cagaatacacagaccgtggaccgctcgcgctactacacccagcgccgcggcaccgcccag
cagcgcggcaatgcctacagctccggctcccgctatggcaccagccattctgcgcgctac
tctacccgcagctacccgcagacctatccccgggctatgccgcgcttccgcaacctgcag
gatgagggctccggcctgacgcccagtcatggtgaaggactgttcattgaggagaacacc
cccttcggcagtgacgcacaggccctgcgcgagcagcttgcacgctaccgcaacatggcc
gcctccggccgctggcgcccgctgcccgcaggcccggcaatgaccatcggcgccaagcac
aacaacgtggtctacctgcgcaacatgctcgccgtgtacggggattactacggctacggc
gatatgaacagcaagaagttcgaccagagcctgcaccaggcggtggtgcgcttccagatc
cgccacggactcaagccagacgggattgtgggcaagcagacccgcgagcgcctgaatatc
tcccctaccgcacgtgcgcacatcatcgaggccaatatccgccgtcgggaaaagctgccc
gccaacctcggcgaccgctttatccaggttaacgtccctggttacaggctcaactatgtg
gaacacgaccgcatcaagctgtcgatgaatgtggtggtgggcaagaagattcaccagaca
ccggagatcaatactcgcgtcgctcgcgtggtgtttaaccccacctggacggtaccgcgc
agtattctggtgaatgagattctgcccaaggcccgcgccaatcctcacggcatggaaaat
atgggttaccgggtggtcaacggcagtggtgagtatctgccgctgagctcccagaacctg
aagcgcgccgcggctggtggtttcctgatgcgccagaagggcggggagcagaacattctc
ggccggataaaattcgagattcccaactcggatgatatctacctgcacgacacccgcgcc
aagagcctgttcggccttaccgatcgcgactacagccacggctgcgtgcgcctggccaaa
ccccggcagctggccgaggtactgctgcgggacgagcctggcgactggagccgctaccgt
atcgagcagctgaccaccggcgacgaaaccaccgaggtgcgcatgagcaaaaatgtgaag
gtgtacctcacctactggaccgcctgggtcgacggtgagggccgcatgcacttccgcccc
gacatctacggcaaagatggcctcgcggtgaaccagttcaactga
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