KEGG   Microbulbifer sp. YPW1: HUW35_05200
Entry
HUW35_05200       CDS       T10374                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
micy  Microbulbifer sp. YPW1
Pathway
micy03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:micy00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HUW35_05200 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:micy02044]
    HUW35_05200 (tssH)
Secretion system [BR:micy02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   HUW35_05200 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_5 Clp_N AAA_16 AAA_22 nSTAND3 NBD_SMAX1 Sigma54_activat AAA_25 TniB Zeta_toxin AAA_23 AAA_7 NACHT Torsin TIP49 AAA_18 HOOK Hpr_kinase_C HH_RND_rel FapA Mis12 DUF7260 Nuf2_DHR10-like DUF2203 Lant_dehydr_C
Other DBs
NCBI-ProteinID: QKX16434
LinkDB
Position
complement(1225793..1228456)
AA seq 887 aa
MINVDLKRLVDTMTPVMRESLEGAAGLCLAQSQYNVELEHWLLKLLDQSDTDFYHLLEKH
DVNPSNLAKQLAGAIARFKSGSSRPAALSPSIVEAAKNCWILASIDFGHRAVSSGHLLAA
LLLEEASRRQLLESCPELKSIAPESIRETARAMFGHSGESSAVSGAEHSADGAQVAVAAS
KAPALDKYTVNLTQRARDGEIDPVLGRDEEIRQCIDILTRRRQNNPILTGEAGVGKTAVV
EGFALRIASGDVPTPLRDVTVRTLDLGLLQAGASVKGEFENRLKSVIEEVRASASPIILF
IDEAHTMIGAGGKEGQGDAANLLKPALARGELRTIAATTWAEYKKYFERDPALTRRFQVV
KVEEPDEQKAVDMMRGIAPSLESHHKVRILDEAVVASVKLSHRYIPGRQLPDKSVSLLDT
ACARVALSQSSTPGAIEDMQRIVASSTRTIEKLQRENAATGVHEDAIQQLQLEQQEAQQQ
LDRLQSQLQQEQELIAEIRTLRDQIDEEYSKQLSGSDSAVDASALEDFKQQLQTLTEQLQ
EIQGETPLMQSAVDEQSIAEVIANWTGIPVGKMVSNEIEAVQTLAERLNQRVIGQPHALD
AVAQAVRTSRAGLTDPRKPVGVFLFCGTSGVGKTETALALADELFGGEQNITTINMSEFK
EEHKVSMLLGSPPGYVGYGEGGVLTEAARRKPYSVILLDEMEKAHPGVQDIFYNLFDKGT
IKDGEGRDIDFKNTLIIMTSNAGEDAIRAIFNQVEEKPDPEVLLDNIRPHLLQKFKPAFL
GRANVVAYYPLDDENLVEICKINMRRIGKRVKEHYGASFSYDDDVLVNIVARCQEADTGA
RNIEVILNRTLLPSLASECLNRMAKGEDIRQVHVGATEEGDFSYSLS
NT seq 2664 nt   +upstreamnt  +downstreamnt
atgatcaacgtggatctaaaaaggctcgtggataccatgacgcccgtcatgcgcgaatcg
cttgagggtgcagcgggcctctgtctggcgcaaagtcagtacaatgttgagctagagcac
tggctgctgaaactattggatcaatcggatactgatttctaccacctgttggaaaaacac
gacgtcaatccctcgaatctcgccaagcaactggccggtgccatcgcccgtttcaagtcc
ggcagcagtcggccggcggcattgtcgcccagtattgtcgaggccgcgaaaaactgctgg
attctggcgtccatcgattttggccaccgagcggtaagttcaggacatttgctcgcggcg
ctgttgctggaagaagcctctcgtcgccagctattggagtcctgcccggaactgaaaagt
atcgctcccgagtcaatccgcgaaaccgctcgggccatgtttggccacagtggagagtcc
agcgcggtaagcggcgcggagcacagcgcagatggcgcccaggttgcggttgccgcgagc
aaggcgccggcgctggataaatatacggttaacctgacccagcgcgctcgcgatggagaa
atcgaccccgtactcgggcgcgatgaggaaattcgccagtgtatcgatattcttacccgc
cgccgccagaataacccgattcttaccggcgaagctggcgtgggtaaaaccgctgtggtc
gaagggttcgcactgcgtatcgccagcggtgatgttccgacgccactgcgcgatgtcact
gtgcgaaccctggatctgggcctgctgcaagccggcgccagcgtaaaaggggagttcgaa
aatcgtctgaagtccgtaattgaagaagtgagagcttcggcgtcaccgatcatcctgttt
atcgacgaagcccataccatgattggtgcgggcggcaaggaaggacagggcgatgccgcc
aacctgttaaagcctgctctggcgcggggcgaattgcgtactatcgctgccaccacctgg
gcagagtacaagaaatactttgagcgcgacccggcacttacccgccgcttccaggtagtc
aaagtcgaagagccagacgaacagaaagccgtggatatgatgcggggtatcgcgcccagc
cttgaatctcaccacaaggtgcgcattctggatgaggccgtggtcgcgtcggtcaagctt
tctcatcgttatatccccggaagacagctacccgataaatcggtgagcctgctcgacacg
gcgtgcgcgcgcgtcgccctgagtcagtcctctactccgggtgcaatcgaggatatgcag
cgcattgtcgccagcagcacccgcaccattgaaaaactgcagcgcgaaaatgccgcgact
ggtgtgcacgaagatgcgattcagcaactgcagctggaacagcaggaagcgcagcagcag
ctggatcgtttgcaaagtcaactgcagcaggagcaggaactgattgcagagatccgtacc
ctgcgcgaccaaatcgatgaagagtattccaagcagctctctggtagtgatagtgccgtt
gatgcctcggcgctggaggatttcaagcagcagttacaaactctcacagagcagttgcag
gagatccagggagaaacgccactgatgcagtcggcggtagacgagcagtctattgccgag
gtcattgccaactggaccgggataccggtcggcaaaatggtcagtaatgaaattgaagcg
gtgcagacgcttgctgagaggctcaatcaacgggtcatcggtcagccccacgcactggac
gccgttgcacaggcggtgcgcacttcccgcgctggccttaccgacccgcgcaagcccgtg
ggcgttttcctgttctgtggtaccagtggcgtgggtaaaaccgagacggcactggcgctg
gcagacgagctgttcgggggtgagcaaaatatcaccaccatcaatatgtccgagttcaag
gaggagcacaaagtctccatgctgctcggatcacctcccggctatgtcggatacggtgag
ggcggtgtactgactgaggccgcgcggcgcaagccatactctgtgatattgctggatgaa
atggaaaaggcgcatcccggtgtacaggatatcttttacaacctgttcgacaagggcact
atcaaggatggtgaaggccgcgatatcgacttcaagaatacgctgatcatcatgacttcc
aatgcgggtgaggatgcgatccgcgcaatcttcaatcaggttgaagaaaagccggatcct
gaggtgctgctggacaatatccgtccgcaccttctgcagaaattcaagccggcatttctc
ggtcgcgccaatgtggttgcctattacccgctggatgatgaaaacctggtggaaatctgc
aagatcaatatgcgccgtattgggaagcgtgtgaaggagcattacggagccagcttcagt
tatgacgacgatgtactggtcaatatcgttgcccgttgtcaggaggcggataccggtgcg
cggaacatcgaggtaattctcaaccgtacactgctgccgtcactggcgagtgaatgtctg
aatagaatggcgaagggtgaagatattcgtcaggtgcatgtgggggccacagaggagggt
gacttcagttattcgcttagctga

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