Microbulbifer sp. YPW1: HUW35_05385
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Entry
HUW35_05385 CDS
T10374
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
micy Microbulbifer sp. YPW1
Pathway
micy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
micy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HUW35_05385 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
micy03019
]
HUW35_05385 (orn)
03009 Ribosome biogenesis [BR:
micy03009
]
HUW35_05385 (orn)
Messenger RNA biogenesis [BR:
micy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HUW35_05385 (orn)
Ribosome biogenesis [BR:
micy03009
]
Eukaryotic type
Pre-60S particles
RNases
HUW35_05385 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QKX16467
LinkDB
All DBs
Position
complement(1275980..1276522)
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AA seq
180 aa
AA seq
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MDQNNLIWIDLEMTGLNPEKERIIEIATVVTDSRLNVLAEGPVMAIHQSDALLAAMDDWN
TEQHGGSGLVTRVKESQISEHKAERETIEFLQQWVPEGASPMCGNSIGQDRRFLVKYMPL
LERYFHYRNLDVSSVKELARRWRPDVLEGVKKTSSHLALDDIHDSINELKHYREHFFRMS
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
gtggatcagaataatctgatctggatcgatctggaaatgaccggcctgaatccggagaag
gagcgcatcatcgagattgcgacggtggtgacggattcgcgcctgaatgtgctggcagag
ggcccggtgatggcgatccatcagagcgatgcgctgctggctgcgatggatgactggaat
acggaacagcatggcgggtcgggtctggtgacccgggtgaaggagtcgcagatcagtgaa
cacaaggcggaacgggagacgatcgagttcctgcagcaatgggtgcccgagggagcctcg
cccatgtgcggtaactccatcggtcaggatcgccggttcctggtgaagtacatgccacta
ctggagcgttacttccactaccgcaatctggatgtgagctcggtgaaggagctcgcccgc
cgctggcgcccggatgttctggagggggttaagaagacttcatcgcatctggctttggat
gatattcatgattcgattaatgagctgaaacactatcgtgagcacttttttcgtatgagc
tga
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