Microbulbifer sp. YPW1: HUW35_06205
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Entry
HUW35_06205 CDS
T10374
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
micy Microbulbifer sp. YPW1
Pathway
micy03030
DNA replication
micy03410
Base excision repair
micy03420
Nucleotide excision repair
micy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
micy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HUW35_06205 (polA)
03410 Base excision repair
HUW35_06205 (polA)
03420 Nucleotide excision repair
HUW35_06205 (polA)
03440 Homologous recombination
HUW35_06205 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
micy03032
]
HUW35_06205 (polA)
03400 DNA repair and recombination proteins [BR:
micy03400
]
HUW35_06205 (polA)
Enzymes [BR:
micy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HUW35_06205 (polA)
DNA replication proteins [BR:
micy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HUW35_06205 (polA)
DNA repair and recombination proteins [BR:
micy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HUW35_06205 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUW35_06205 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
WHD_BrxR
HHH
Motif
Other DBs
NCBI-ProteinID:
QKX18940
LinkDB
All DBs
Position
complement(1470843..1473587)
Genome browser
AA seq
914 aa
AA seq
DB search
MSNDKTSSAPLILVDGSSYLYRAFHALPPLATSSGQPTGAVRGVISMLRKHLKEHPDSPV
VVVFDAKGKTFRDELFEEYKSHRPPMPDDLRAQIQPIHDIIDAMGLPRLVIDGVEADDVI
GTLALQAADKGMDVIISTGDKDMAQLVRPGVTLVNTMSNTVLDVEGVKEKFGVGPELIID
FLALMGDKADNIPGVPGVGEKTALALLQGLGSLKDIYADLDAIAPLGFRGSKTLAKKMQE
HKDAADMSYVLATIKTDVEMDYKPESLANAEPDTDKLREMFSELEFRSWVEELGGDGDAE
TAAEALAVERNYSIILDEKELDGWLEKLAKAEVFAFDTETTSLNYMQAKLVGVSFAVEAG
EAAYLPLAHDYMGAPQQVDFDAALAKLKPLLEDENVHKVGQNLKYDSHILANYDIELRGI
ARDTMLESYVLNSTASRHDMDSLAQKYLGESTVKFEDIAGKGAKQLTFNQIELDKAGPYA
AEDADITLRLHQDLSGRLAKEPSLEKVLDEIEMPLVPVLVHIERNGAYIDAAMLKKQSVE
LEEKMRELEQQAYEEAGEEFNLGSTKQLGAILFEKLEIPVIKKTPKGAPSTAEPVLQELA
LSHKLPALIMQYRGMAKLKNTYTDKLPQMIDPATGRVHTSYHQAVAATGRLSSSDPNLQN
IPIRTEEGRRIRQAFVADPRINGGSVIVAADYSQIELRIMAHLSGDKGLLDAFAAGADIH
RATAAEVFEVSADDVSDEQRRRAKAINFGLIYGMSAFGLAKQLDIPRADAQTYIDRYFER
YPGVLEYMENTRKQAADKGYVETLFGRRLYLPEINSRNGMQRQAAERTAINAPMQGSAAD
IIKRAMIAVDAWLRDEGLKSRLIMQVHDELVLEVPADERDLVVKRIPELMQAAAELDVPL
IADLGEGANWDEAH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgacaagacttcttccgcgccattgatcctggtcgatggatcctcctacctg
tatcgcgccttccacgcactgccccccctggcgaccagcagtggccagcccaccggcgcg
gtgcgcggtgtgatttccatgttgcgcaaacatctcaaggagcacccggacagcccggta
gtggtggtttttgatgccaagggaaaaactttccgcgacgaactgttcgaggaatacaaa
tcccaccgaccgccgatgccggatgacctgcgcgcacagatccagcccatccacgacatc
atcgatgccatggggctgccgcgactggtaatcgacggggtcgaggcggacgatgtgatc
ggcaccctggctctgcaggctgccgacaagggcatggatgtgatcatctccaccggcgac
aaggacatggcccagctggtgcgcccgggcgtaaccctggtgaataccatgtccaacacg
gtgctggatgtggagggcgtgaaagaaaagtttggtgtgggcccggaactgatcatcgac
ttcctcgcgctcatgggagacaaggccgataacattcccggcgtgccgggtgtgggcgag
aagaccgcgctggcactgcttcaggggctcggcagcctgaaggacatctacgccgacctc
gacgccatcgcgccgctcggctttcgcggttccaaaaccctggccaagaaaatgcaggag
cacaaagacgcggcggatatgtcctacgtgctcgccaccatcaagactgacgtggagatg
gactacaaaccggagtccctcgccaacgccgaaccggataccgacaaactgcgggagatg
ttcagcgagctggaattccgcagctgggtggaggagctggggggtgatggcgatgccgaa
acagccgcggaagcgctcgctgtcgagcgcaactacagcatcatcctcgacgaaaaggaa
ctcgacggctggctggaaaaactcgccaaagccgaggtgttcgcattcgatacggaaacc
accagcctcaactacatgcaggcaaaactggtgggtgtgagctttgccgtggaagcgggc
gaggccgcctatctgcccctggcccacgactacatgggcgcaccgcagcaggtggacttc
gatgcggcgctggcaaagctgaagccgttgctcgaggacgaaaacgtccacaaggtcggc
cagaacctgaagtacgacagccacattctcgccaactacgatatcgaactgcgcggtatc
gcgcgcgacaccatgctggaatcctatgtgctgaacagcaccgccagccgccacgacatg
gatagcctcgcgcagaaatatctcggcgaatccacggtcaagttcgaggatattgccggc
aagggcgccaaacagctgactttcaaccagatcgagctggacaaggccgggccctacgcc
gcggaagacgccgacatcaccctgcgcctgcaccaggacctgagcgggcgcctggccaag
gagccgagcctggagaaagtgctcgacgagatcgagatgccgctggtgccggtactggta
catatcgaacgcaacggtgcctatatcgatgcggcgatgctgaaaaagcagtcggtcgag
ctggaagaaaagatgcgcgagctggagcagcaggcatacgaggaagctggtgaggagttc
aatctcggctccaccaaacagctgggcgcgatcctgttcgaaaagctcgaaatcccggtg
atcaagaaaacccccaagggcgctccctccaccgcggaaccggtgctgcaggagttggcc
ctgtcacacaagctgccggcgctgatcatgcagtatcggggcatggccaagctgaagaac
acctataccgacaagctgccgcagatgatcgacccggccaccggccgtgtgcacacctcg
tatcaccaggcggtagcggccaccggccgcctgtcatccagtgatcccaacctgcagaac
atcccgattcgcaccgaagaaggccgccgcattcgccaggcgtttgtcgccgacccgcgc
atcaacggcggcagcgtgatcgtcgcggcggattactcccagatcgagctgcgcatcatg
gcgcacctgtccggggacaaggggctgctggatgccttcgccgcgggcgccgacattcac
cgcgctactgcggcggaagtgttcgaggtttcggcggacgacgtgagcgatgaacagcgt
cgccgcgccaaggcgatcaacttcggcctgatttacggcatgagcgccttcggcctggcc
aagcagctggatattccgcgagcggatgcgcagacctatatcgatcggtattttgagcgc
taccccggtgtcctcgaatatatggagaacacccgcaaacaggccgcggacaagggctat
gtggagaccctgttcggccgccgcctgtacctgccggaaatcaattcccgcaacggcatg
cagcgccaggccgcggagcgcaccgcgatcaatgcgccgatgcagggcagcgcggcggat
attatcaagcgcgcgatgattgcggtggatgcatggctgcgcgacgaggggctcaagtcc
cgcctgatcatgcaggtacacgatgaactggtgctggaagtgccggcagatgagcgggat
ctggtggtaaaacgtataccggagttgatgcaggcggccgcggaactggatgtaccgctg
atcgcagatctcggggaaggggccaactgggacgaggcgcactga
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