Microbulbifer sp. YPW1: HUW35_06770
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Entry
HUW35_06770 CDS
T10374
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
micy Microbulbifer sp. YPW1
Pathway
micy03420
Nucleotide excision repair
micy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
micy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HUW35_06770 (uvrD)
03430 Mismatch repair
HUW35_06770 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
micy03400
]
HUW35_06770 (uvrD)
Enzymes [BR:
micy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUW35_06770 (uvrD)
DNA repair and recombination proteins [BR:
micy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUW35_06770 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HUW35_06770 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
QKX16717
UniProt:
A0A7H8PWC4
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All DBs
Position
1600395..1602620
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AA seq
741 aa
AA seq
DB search
MDVSELLDPLNDPQREAVAAPPGNQLVLAGAGSGKTRVLVHRIAWLMQVEGASPYSIMAV
TFTNKAAREMRGRIEELLGVNTFGMWVGTFHGLAHRLLRAHWQEAKLPQNFQILDSDDQL
RLIKRVQNELGLDDKKWSPRETQWWIGAQKDEGIRPQYIQLTGDPWLQTMVRIYSAYEEA
CQRAGVVDFGELLLRAHELLLNNDSILAHYRRRFPFILVDEFQDTNTIQYAWLRLLAGDQ
CCITAVGDDDQSIYGWRGAKIENIQHFEADLKGVQTVRLEQNYRSTSTILNAANAVIAHN
SGRLGKELWTEGDKGEPISLYSAYNEQDEARFIVERIQDWVRDGNRHDSVAILYRSNAQS
RVLESALRDVLPYRIYGGLSFYQRKEVKDALSYMRLITNRHDDTSFERVVNTPTRGIGVR
TVDLVREFAREHGSSMWDAAAKMLQQKVLAARAGNALANFLSLIDALDEESTDKTLDHIA
ELVVEQSGLIEFHSKEKGEKGQTRVENLQELVSACREYTGEPTVDPDGEAMDEEEIPLIN
QFLDGAALDSGEGQADEFVDAVQLMTLHSAKGLEFPLVFMAGVEENLFPHKMSAQEPGRM
EEERRLCYVGITRAMQKLYITYAESRRLFGSETYNKPSRFVSEIPVEYIHEVRLKTEVSK
PLFQPNYGKFGGGVNPYSDAAPEFDDDLPPLALGGRVDHAKFGEGTVVQFEGSGPRARVQ
VNFDDAGSKWLVVSMAKLQPL
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatctgaactcttagaccccctcaacgacccccagcgcgaagccgtcgcggcg
ccgccgggcaatcaactggttctggctggcgccggctcgggcaagacccgcgtgctggtg
caccgtatcgcctggctgatgcaggtggagggggcatcgccctactccattatggcagtg
accttcaccaacaaggccgcacgcgagatgcgcgggcgcatcgaggagctgctgggggta
aataccttcggcatgtgggtgggcactttccacgggctcgcccaccgcctgctgcgcgcc
cactggcaggaagcgaagctgccacagaacttccagatcctcgacagcgacgaccagctg
cgtctgatcaagcgggtgcagaacgaactggggttggacgacaagaagtggtccccgcgg
gagacccagtggtggatcggcgcccagaaagatgagggcatccgcccgcagtatatccag
ctgaccggcgatccctggctgcagaccatggtgcggatttacagcgcctacgaagaggcc
tgccagcgcgccggggtggtggattttggcgagctactgttgcgcgcacacgagctgttg
ctcaacaacgacagcattctcgcccactatcgccgccgcttcccgttcatcctggtggac
gagttccaggataccaacaccattcaatacgcctggctgcgcctgctcgccggcgatcag
tgctgtatcaccgcggtgggcgacgacgaccagtccatttacggctggcgcggcgccaag
atcgagaatatccagcacttcgaggccgacctgaaaggtgtgcagacggtgcgcctggag
cagaactaccgctccaccagcaccatcctcaacgccgccaacgcggtcatcgcgcacaac
tccggccgtctcggcaaggagttgtggaccgagggtgacaagggcgaacctatctcgctc
tactccgcctacaacgaacaggacgaggcgcgctttattgtcgagcgtatccaggactgg
gtgcgcgacggtaatcgccatgacagcgtggcaatcctgtatcgctctaacgcccagtct
cgggttttagaaagcgctctgcgcgatgttttgccttaccgtatttatggtggactaagt
ttctaccagcgcaaagaagtaaaagatgcgctttcttacatgcgcctgatcactaaccgt
cacgacgatacctccttcgagcgggtggtgaatacccccacccgcgggatcggcgtgcgc
accgtggatctggtgcgcgagttcgctcgcgagcacggcagttccatgtgggatgccgcg
gccaagatgttgcagcagaaggtgctcgccgcccgcgctggcaacgcgctggccaatttt
ctcagtctgatcgacgccttggacgaagagagcaccgacaaaaccctcgaccatatcgct
gagctggtggtggagcaatctggcctgatcgaatttcatagtaaggaaaaaggcgagaag
ggtcagacccgggtggaaaacctgcaggagctggtcagcgcttgtcgagagtatactggt
gagcctaccgtcgaccctgatggcgaagcgatggacgaggaagagattccactgattaac
cagtttctcgatggtgcggcacttgattctggcgaaggtcaggcagacgagttcgttgac
gcggtgcagctgatgaccctgcactccgccaaaggcctcgagttcccgctggtatttatg
gccggggtggaggaaaacctgttcccgcacaagatgtccgcccaggaacccgggcgcatg
gaggaagagcgccgcctgtgttacgtgggtatcacccgcgcgatgcagaagctgtatatc
acctacgccgagagccggcgtctgtttggcagtgagacctacaacaagccgtcgcgcttt
gtgagtgagattcccgtggaatacattcacgaggtgcgcctgaagacggaagtttccaag
ccattgttccagccgaattatggaaagttcggcggtggggttaacccctactccgatgcc
gccccggaatttgacgacgacctgccaccgctggcgctgggggggcgcgtcgaccacgcc
aagtttggcgagggtaccgtggtccagttcgagggcagcggtccgcgtgcgcgggtacag
gtaaacttcgatgatgccgggagcaaatggctggtagtatccatggccaagttgcagccc
ctctga
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