Microbulbifer sp. YPW1: HUW35_06795
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Entry
HUW35_06795 CDS
T10374
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
micy Microbulbifer sp. YPW1
Pathway
micy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
micy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUW35_06795 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
micy03019
]
HUW35_06795 (groL)
03110 Chaperones and folding catalysts [BR:
micy03110
]
HUW35_06795 (groL)
03029 Mitochondrial biogenesis [BR:
micy03029
]
HUW35_06795 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
micy04147
]
HUW35_06795 (groL)
Enzymes [BR:
micy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HUW35_06795 (groL)
Messenger RNA biogenesis [BR:
micy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HUW35_06795 (groL)
Chaperones and folding catalysts [BR:
micy03110
]
Heat shock proteins
HSP60 / Chaperonin
HUW35_06795 (groL)
Mitochondrial biogenesis [BR:
micy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HUW35_06795 (groL)
Exosome [BR:
micy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HUW35_06795 (groL)
Exosomal proteins of other body fluids (saliva and urine)
HUW35_06795 (groL)
Exosomal proteins of breast cancer cells
HUW35_06795 (groL)
Exosomal proteins of colorectal cancer cells
HUW35_06795 (groL)
Exosomal proteins of bladder cancer cells
HUW35_06795 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QKX16721
LinkDB
All DBs
Position
complement(1607416..1609056)
Genome browser
AA seq
546 aa
AA seq
DB search
MSAKVVKFSDDARERMLAGVNILADAVKATLGPKGRNVVLSKSFGAPRVTKDGVSVAKEI
ELKDKFQNMGAQMVKEVASKTADVAGDGTTTATVLAQALVREGHKSIAAGMNPMDLKRGI
DTAVKAAVEELAKLAKPCDDTKSIGQVGTVSANWNEDIGKIIAEAMEKVGRDGVITVEEG
KSLNNELEVVEGMQFDRGYLSPYFVTNQEKMQAELDNPYILLFDKKISNIRDLVPVLESV
AKSGRPLVVIAEDIEGEALATLVVNSLRGIIKVAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEEVGLTLEKVQLEQLGSAKRVVISKDNTVVVDGAGDKSAIDGRVKQIRAEIEASSSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDLVDDAFHATRAAVEEGIVAGGGLTLV
RVADSLRGLNGKGGLKGANDDQQVGINIALRAMEEPFRQIVANAGVEGSVVLNNVRSDDS
ANFGYNAQTGEYGDMLEFGIIDPAKVTRSALQNAGSIAGLMLTTEVMVADKPEEKKSDAE
ADAYDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccaaggtagtcaagttttccgatgacgcccgcgaacgcatgctggcgggcgtg
aacattctcgccgacgcggtaaaagccaccctggggccgaaaggccgcaacgtggtgctg
agcaaaagctttggcgccccgcgtgtgaccaaagacggtgtgtccgtagccaaggaaatc
gagctgaaggacaagttccagaatatgggcgcgcagatggtgaaagaagtcgcgtccaaa
accgcggacgtggccggcgacggcaccaccaccgccacggtcttggcccaggcactggtg
cgcgagggacacaagtccatcgctgcgggtatgaaccccatggatctgaaacggggtatc
gacaccgcggtaaaagcggcggtggaagaactcgcgaaactggccaagccctgtgacgac
accaagtccatcggccaggtgggcaccgtctctgccaactggaacgaggacatcggcaag
atcatcgccgaggcgatggaaaaagtgggccgcgacggtgtaattaccgtggaggagggc
aagtccctcaacaatgaactggaagtcgtggaaggtatgcagttcgaccgcggttacctg
tcgccgtacttcgtgaccaaccaggaaaagatgcaggcggaactggacaacccctacatc
ctgctgttcgacaaaaagatcagcaatatccgcgacctggtgccggtactggagtccgta
gcgaaatcgggccgcccgctggtcgtcatcgctgaagatattgaaggcgaagcgctggcg
acgctggtggtcaacagcctgcgcggcatcatcaaggtggccgcggtaaaagcccccggc
ttcggcgaccgccgcaaggccatgctggaggatatcgccatccttaccggtggcaccgtg
atctccgaagaggtagggctgaccctggagaaagttcagctggaacagctcggcagcgcc
aagcgtgtggtgatcagcaaggacaacaccgtggtggtggacggcgccggcgacaagtcc
gcgatcgacggccgcgtaaaacagatccgcgcggaaatcgaagcatccagctccgattac
gacaaggagaaactgcaggagcgcgtggccaagctggccggcggtgttgcggtgatcaag
gtgggcgccgccaccgaagttgaaatgaaggagaaaaaagatctggtggacgacgccttc
cacgcaacccgtgcggcggtggaagaaggtatcgtcgccggtggtggtctgaccctggtg
cgcgttgccgatagcctgcgcggtctgaatggaaaagggggccttaaaggggccaacgac
gatcagcaggtgggtatcaatatcgccctgcgcgcgatggaagaacccttccgccagatc
gtcgccaatgccggtgtggaaggcagcgtggtgctgaacaatgtgcgctcggacgacagc
gccaacttcggctacaacgcccagaccggcgaatacggggatatgctggagttcggcatc
atcgaccccgccaaggtcacccgctcagcgctgcagaacgcaggatccattgccgggctg
atgctcacgaccgaagtgatggtggcagacaagcccgaggagaaaaaatcggatgcggag
gcagacgcttacgatttttga
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