Microbulbifer sp. YPW1: HUW35_10310
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Entry
HUW35_10310 CDS
T10374
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
micy Microbulbifer sp. YPW1
Pathway
micy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
micy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HUW35_10310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
micy02022
]
HUW35_10310
02035 Bacterial motility proteins [BR:
micy02035
]
HUW35_10310
Two-component system [BR:
micy02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
HUW35_10310
Bacterial motility proteins [BR:
micy02035
]
Pilus system
Twitching motility proteins
HUW35_10310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_16
HTH_30
AAA_5
AAA_19
DUF7928
HTH_50
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QKX17360
LinkDB
All DBs
Position
complement(2511243..2512667)
Genome browser
AA seq
474 aa
AA seq
DB search
MADRQPIALIIDDEPDICNLISMTLHRMNVRSDIAMSVAEARRQLEKKRYDFCLTDMKLP
DGTGLQVVEHIQDLPADRLLPVAVITAHGNMDTAIAALKLGAFDFVSKPVNLERLRNLVQ
LALRLNEARYVEQQEFPTLLQGQSPAIQELRKQIEKVARSDAPALIFGEAGSGKELTARC
IHQHGPRAQQPFVPVYCASLAAERLEETLFGSESEPGLIQRAHGGTLFLDEVASLPPDIQ
VKLLRAIQEKRYFSEIDAARTDLDIRILSASKQPLAKAVREGRFRSDLYYCINVIELHAP
PLRKRLEDIPLLVRDMLRRISTAKKGAAPKAAPDAISALQAYPLPGNLRELENILERAVT
LSERNTLHAADLLIPAMQPTRPPETGEPSAYSNNNELEQPVMTSLPESKQSTYPGQFATS
DYSSLDDFLQTIEREAIETTLNETDWNRTAAAEKLGISFRSLRYRLKKLGLENE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcgtcaacccatagcactaataatcgacgacgaaccggatatctgtaacttg
atatccatgaccctacaccgcatgaacgtgcgctcagatatcgccatgtcagtcgccgaa
gcccgtcgacaattggaaaaaaagcgctacgacttctgcctgaccgacatgaagttaccg
gatggtactgggctgcaggttgttgaacatattcaggatctaccggcagaccgtttactt
ccggttgccgtcataaccgcgcacggcaatatggataccgccattgccgcgcttaaactc
ggtgcatttgattttgtcagcaagccggtgaatctagagcgtctgcgcaacctggtgcag
ctggcgttgcgcttgaacgaagcccgctacgtggagcagcaggaattcccgacactgcta
caggggcaatctccagcaatacaggaactgcgcaagcaaattgaaaaagttgcgcgcagc
gatgctccggcgcttatcttcggcgaggcgggcagtggtaaagaactgactgcacgctgt
atccaccaacacggcccgcgcgcgcagcaaccatttgtacccgtttactgtgccagcctg
gccgcagagcggctcgaagagacgctatttggcagcgaatcggaaccgggtttaatccag
cgtgcacatggcggcactctgtttctcgatgaagttgccagccttcccccggatattcag
gtcaaactccttcgagccattcaggagaaacgttatttttcagaaatagatgcagcacgc
accgacctggatattcgcatcctcagcgccagcaaacagcccctggctaaagcagtgcga
gagggacgatttcgcagcgatctttactactgtatcaacgttattgaactacacgctcca
ccccttcgaaaaaggcttgaggatattccgcttctggttcgcgatatgctacgcaggatt
tccaccgcaaaaaaaggcgctgctccgaaggccgcaccagatgccatcagcgccctacag
gcctaccccctccctggaaacctgcgcgagcttgagaacatactcgagcgcgccgtgacc
ttgagtgagcgcaacacactgcatgccgcagacctgctgattccagctatgcagccgacc
aggcctcccgaaactggagagccgtcagcttattcaaataacaacgaactcgaacagcca
gtgatgacgtcacttccggagtcaaagcaatccacctaccccggccagttcgcaacttca
gattactcaagcctggatgactttctgcaaaccatcgagcgggaagctatcgaaacgacc
ctcaatgaaaccgactggaacaggacggcagcagcagaaaaactggggatcagtttccgt
tccctgcgctaccgtttgaaaaagctggggttggaaaacgaatga
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