Microbulbifer sp. YPW1: HUW35_10885
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Entry
HUW35_10885 CDS
T10374
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
micy Microbulbifer sp. YPW1
Pathway
micy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
micy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HUW35_10885 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
micy03400
]
HUW35_10885 (ruvB)
Enzymes [BR:
micy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUW35_10885 (ruvB)
DNA repair and recombination proteins [BR:
micy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HUW35_10885 (ruvB)
RecFOR pathway proteins
HUW35_10885 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_3
Mg_chelatase
AAA_22
AAA_14
AAA_16
RNA_helicase
nSTAND3
AAA_2
AAA_17
ABC_tran
Rad17
AAA_18
AAA_28
NB-ARC
RsgA_GTPase
NTPase_1
AAA_24
TsaE
Motif
Other DBs
NCBI-ProteinID:
QKX17461
UniProt:
A0A7H8PZE3
LinkDB
All DBs
Position
2651259..2652278
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AA seq
339 aa
AA seq
DB search
MIEADRLIAPEPIGPSGQEEQYDRAVRPKTLSDYVGQPVVREQMEIFIQAAKLRKEALDH
TLVFGPPGLGKTTLANIIAAEMGVAIKTTSGPVLEKAGDLAAIMTNLEPGDVLFIDEIHR
LSPHVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGLLTSPLRDRFGI
VQRLEFYNVEDLTSIVARSARLMGVEMDQGGAHEVARRARGTPRIANRLLRRVRDYAEVK
GNGHVCTQTADSALNMLNVDASGFDQLDRRVLLTMIEKFDGGPVGVDSLAAAVSEERDTI
EDVLEPYLIQQGYLARTPRGRVVTALAYAHFGIPKPDRT
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgattgaagctgaccgcctaatcgcccccgaacccatcggcccctccgggcaggaagag
cagtacgaccgcgccgtgcgcccgaaaaccctgtccgactatgtcggccagccggtggtg
cgggagcagatggaaatctttatccaggcggcgaagctgcgcaaagaagcgctggaccac
accctggtgttcggcccgccgggcctgggcaagaccacgctggccaatattattgccgcg
gaaatgggcgtggcgatcaagaccacctccggcccggtgctggaaaaagccggcgatctc
gccgccatcatgaccaatcttgagcccggggatgtgctatttatcgacgaaatccaccgc
cttagcccccatgtggaagaggtgctgtacccggcgatggaggattaccagctcgatatc
atgatcggtgaagggccggcagcgcgctccatcaagctcgatctgccgccgttcaccctg
gtgggtgcgaccacgcgcgccggtcttctcacttcgcccctgcgcgatcgcttcggcatt
gtgcagcgtctggagttttacaatgtcgaggacctgaccagcattgtcgcccgctccgcc
cggttgatgggcgtggaaatggaccagggcggggcccacgaggtcgcacgccgcgcccgc
ggtacaccgcgtattgccaaccgcctgctgcgccgggtgcgggactatgcggaagtgaag
ggcaatggtcacgtctgtacgcagaccgccgacagtgcgctcaacatgctgaatgtggat
gccagcggcttcgaccagctcgatcgccgtgtgctgctgaccatgatcgagaaattcgat
ggcggtccggtcggcgtcgacagcctggccgccgcggtaagtgaggagcgggataccatt
gaggacgtgctggagccctacctgatccagcagggctatcttgcacgcactccgcgcggg
cgggtagtgaccgcgctggcctacgcgcatttcggtattcccaagccggaccgcacctga
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