Microbulbifer sp. YPW1: HUW35_11160
Help
Entry
HUW35_11160 CDS
T10374
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
micy Microbulbifer sp. YPW1
Pathway
micy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
micy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HUW35_11160 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
micy03019
]
HUW35_11160 (rhlB)
Enzymes [BR:
micy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HUW35_11160 (rhlB)
Messenger RNA biogenesis [BR:
micy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HUW35_11160 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Utp25_C
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
QKX17506
LinkDB
All DBs
Position
2710262..2711770
Genome browser
AA seq
502 aa
AA seq
DB search
MIGKFFRRSSDKSQSAPEGQKASGSQPEKSASSAPQSERKSEGGRQRNRRRGGGGGKGGD
KARKQPPQKPWSLDEFPVPEAEGKVRFHDLDLPLPLMHAIADLGFQYASPIQGQSLPHTL
NGHDLVGKAQTGTGKTAAFLITVIDDLLKNPFEGQRYAGEARALIIAPTRELVMQIADDA
KGLCKYTDLEIHTLVGGMDYQKQQKALNERLVDILVATPGRLLDFVSKRDCFLDQTEILV
IDEADRMLDMGFIPDVRRIVRQTPRKTHRQTMFFSATFTPEVDDLVEQWTSEPVIVEIQP
ERVATDTVTQHVYLVSGDEKYPLLFNIVQQDDVESLIVFANRRDQCRRLHENLLAHGINA
GLLSGEVAQNKRVRTLEDFKTGKSKVLVATDVAGRGIHIDGISHVVNYTLPEEPEDYVHR
IGRTGRAGKSGTSISFACEDDAMRLEPIEALLGSKLKCEVPPEELLVAPPKVHVKRSSGG
DRNDRGGNRGGGRRGGGGRPRR
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
ttgataggtaagtttttccgtcggtcgtcagacaagtcccagagtgcccccgaagggcag
aaagcttccggatcccagccagaaaagagcgcttcttccgcgccgcaatcggagcgcaag
tccgagggtggccgccagcgcaaccggcgtcgcggtggtggcggtggcaagggcggtgac
aaggctcgcaagcaaccaccgcagaagccttggagcctggacgagttcccggtgccggaa
gcagagggcaaggtgcgcttccacgatctggacctgccgctgccgctgatgcacgccatc
gccgacctgggcttccagtacgcctctcctatccaggggcaatccctgccgcataccctg
aacggacacgacctggtgggcaaggcccagaccggtaccggcaagaccgcggccttcctg
atcaccgtgatcgacgacctgctcaagaacccctttgaaggccagcgctacgctggtgag
gcgcgcgcgctgatcatagcgccgacccgcgaactggtgatgcagattgccgacgacgcc
aagggtctgtgcaagtacaccgacctggaaatccacaccctggtgggcggcatggattac
cagaagcagcagaaggcgctgaacgagcgtttggtagatattctggtagccaccccgggt
cgcctgctggacttcgtcagcaaacgggattgctttctcgaccagacggaaatcctggtg
atcgatgaagcggaccgtatgctggatatgggttttatcccggatgtgcgtcgcattgtc
cgtcagaccccgcgcaagacccaccgccagaccatgttcttctccgccaccttcacgccg
gaagtggacgatctggtagagcagtggacttctgagccggtaattgtcgaaatccagccc
gagcgtgtggcgaccgacacggttacccagcacgtgtacctggtttccggagatgaaaag
tatccgctgctgttcaatatcgtgcagcaggacgatgtggaaagcctgatcgtgtttgcc
aaccgtcgcgaccagtgccgccgcctgcacgagaacctgctggctcacggcatcaatgcg
ggtctactgtccggtgaagtggcgcagaacaagcgcgtgcgcacgctggaagatttcaag
accggtaaatccaaggtgctggtggctaccgatgttgccggccgtggtatccacatcgac
ggtatcagccatgtggtgaattacaccctgccggaagagccggaggactacgttcaccgc
atcggccgtaccgggcgcgcgggcaagagcggcacttccatcagctttgcctgtgaagat
gacgcgatgcgtctggagccgattgaggcgctgctgggcagcaagctcaagtgtgaagta
ccgccggaagagctgctggttgcgccgcccaaggtacacgtgaagcgcagcagtggtggc
gaccgcaatgatcgcggtggcaatcgcggtggtggacgtcgcggtggcggtggccgtcca
cgccgttaa
DBGET
integrated database retrieval system
