Microbulbifer sp. YPW1: HUW35_12785
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Entry
HUW35_12785 CDS
T10374
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
micy Microbulbifer sp. YPW1
Pathway
micy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
micy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HUW35_12785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
micy03000
]
HUW35_12785
03400 DNA repair and recombination proteins [BR:
micy03400
]
HUW35_12785
Enzymes [BR:
micy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
HUW35_12785
Transcription factors [BR:
micy03000
]
Prokaryotic type
Helix-turn-helix
AraC family
HUW35_12785
DNA repair and recombination proteins [BR:
micy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HUW35_12785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QKX17779
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Position
3132716..3134245
Genome browser
AA seq
509 aa
AA seq
DB search
MRPDSEICHSARLARDRRFDGRFYTAVKTTGIFCRPICPARPPLEKNVEYFATAAEAAVA
GYRPCLRCRPDAAPGSAAWGLVSTTVQRALNLMRAEREAQSIERLAERLGITSRYLRKLF
AEHVGLSPLQVWQTERALFAFSLLRDTRLPVGDIAFAAGFSSLRRFNAVFKELYQRTPTA
VRRESRVRREPEGRRESAKTKLEDVRAKPIQIYLSYRPPFDWPALLAFFAARTLPGVEQV
IAGEDPEQGEYLRSFQLLGQRGVLRVAHEPERGRLRVSVFGEGCGAILYPLREKLRRQFD
LDADSDEIRGHLQADPLLSAVLKVSPGVRLPGAWDPFEYTLRAILGQQISVAAATTIAGR
VASRYGETFAGPEGELLLFPTAEQLRNADFSEIGVTRTRAQTLRTFVAATLNGEIDFDEP
DLESFCAQMTALPGIGDWTAHYTAMRGLSMPDAFPASDLGILIALGDGERKATAKQALLR
AESWRPWRAYGALLLWQSLKLKSDKGAST
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccctgattccgaaatctgtcacagtgccaggctcgcccgcgaccggcggttcgat
ggccgcttttataccgcggtgaaaaccacgggtatcttctgtcggcccatctgcccggcg
cgcccgccactggagaaaaatgtcgagtattttgcgactgccgcggaggccgcggtcgca
gggtatcgcccgtgtttgcgctgtcgcccggatgctgcgcctggaagtgcagcctgggga
ctggtttccaccacggtgcaacgcgcgctcaatctgatgcgggcagagcgcgaagcccag
tctattgagaggctggcagagcgcctcggcatcaccagccgttacctgcgtaaactgttc
gcggagcatgtcgggctgagcccgttgcaggtctggcagacggagcgtgcgttgtttgcg
ttcagcctgttgcgggacacccgtctgcccgtgggggatattgctttcgcggcgggcttc
agcagcctgcggcgtttcaatgcggtgttcaaagagctttaccagcgcacaccgacagcg
gtgcgccgtgaatcaagggtgcgccgtgaaccagaggggcggcgggagtctgccaaaacc
aagctcgaagatgtgcgcgctaaaccgatccagatttacctgagctaccgtccgccattc
gactggcccgcgttgctggcattttttgccgcgcgtaccttgccgggggtggagcaggta
attgccggggaagatccggagcagggggaatacctgcgcagtttccagttgctcggccag
cgtggcgtgttgcgggtggcccatgaaccggagagggggcgcctgcgggtgagcgttttc
ggcgagggttgtggcgcaatactgtatccgctgcgggaaaagctgcggcgacagtttgac
ctggatgccgatagcgatgaaatccgcggacacctgcaggcggacccactactgagcgca
gtgctcaaggtaagccccggtgtgcgcctgccgggagcctgggatcccttcgaatacacg
ctgcgcgccatcctcggccagcagatctcggtcgctgccgccaccaccatagccgggcgt
gtggcgagccgctacggcgagacgtttgccgggccggaaggagagctgttgctgttcccc
acggctgagcagcttcgcaatgcggacttctccgaaatcggggttacccggacgcgtgcg
caaacgctgcggaccttcgtcgcggccaccctgaatggcgaaatcgactttgacgagccg
gatctcgaatctttctgtgcacagatgaccgcgctgccggggataggcgactggaccgcg
cattacaccgccatgcgcggcctctccatgcccgatgcctttcccgcatccgatctcggg
attctgatcgcgctcggtgatggcgagcgaaaggcgaccgcaaagcaggcccttttgcgc
gccgagtcctggcgcccgtggcgggcctacggggcactattactttggcagtcgctcaaa
ctgaagtccgataagggagcgtcaacatga
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