Microbulbifer sp. YPW1: HUW35_14070
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Entry
HUW35_14070 CDS
T10374
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
micy Microbulbifer sp. YPW1
Pathway
micy00071
Fatty acid degradation
micy00280
Valine, leucine and isoleucine degradation
micy00310
Lysine degradation
micy00362
Benzoate degradation
micy00380
Tryptophan metabolism
micy00410
beta-Alanine metabolism
micy00640
Propanoate metabolism
micy00650
Butanoate metabolism
micy00907
Pinene, camphor and geraniol degradation
micy00930
Caprolactam degradation
micy01100
Metabolic pathways
micy01110
Biosynthesis of secondary metabolites
micy01120
Microbial metabolism in diverse environments
micy01200
Carbon metabolism
micy01212
Fatty acid metabolism
Module
micy_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
micy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HUW35_14070 (fadB)
00650 Butanoate metabolism
HUW35_14070 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HUW35_14070 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HUW35_14070 (fadB)
00310 Lysine degradation
HUW35_14070 (fadB)
00380 Tryptophan metabolism
HUW35_14070 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HUW35_14070 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HUW35_14070 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HUW35_14070 (fadB)
00930 Caprolactam degradation
HUW35_14070 (fadB)
Enzymes [BR:
micy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HUW35_14070 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HUW35_14070 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HUW35_14070 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HUW35_14070 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QKX18001
LinkDB
All DBs
Position
3462212..3464368
Genome browser
AA seq
718 aa
AA seq
DB search
MLFSGKALSVQMLENGIAELKFDLEGESVNKFNRLTVTEFSEALDAIEKAGDIKGLLLTS
GKSVFIVGADITEFGGAFSAGADGIAELMNKNNENINRLEDLPFPTAVAINGYALGGGFE
VCLGCDFRLMGDKAKVGLPEVKLGLIPGWGGTVRLPRVVGVDVAAEWIAAGKEQRPDAAL
AAHAVDAVVPTEQLKDAALKLLARAIDGELDYQQRREIKKSPIPLNDTEALMAFFTTKAF
VGQQAGRNYPSPVNAVTSIEQGYKLDRDEALKIEQQQFIASAQTETATSLVGLFLNDQKV
SKVAKGWEKKSDKEIERAAVLGAGIMGGGIAYQSAYKGTPIKMKDINQDGIDLGLKEAGK
LLTKLVDRGRMTPAKMAETLNRIEPTLSYDGFSDVDIVVEAVVENPKVKHAVLKEVETKV
SEDTVIASNTSTISIDTLAEPLSRPENFLGMHFFNPVHKMPLVEVIRGEKTSENAVARVV
AYANKMGKKAIVVRDCPGFLVNRVLFPYFAGFAMLVRDGADFQQVDKVMERWGWPMGPAY
LMDVVGIDTGVHAEKVMAEGFPERMGKTFTAASDVMYEAGRYGQKNGKGFYNYEEDKKGR
PKKVATDEAYELLKPHVAERTEFESDTVIERMMVPMATELARCLEEGIVDSPAEADMALV
YGIGFPPFRGGIFAWLDSIGLDNFVKMAEKYSDLGELYKPTEGMREMAASGKTYYGDK
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgttatttagtggcaaagcgctatccgtgcagatgctggaaaacggcatcgcggaactg
aaattcgatctggaaggcgaatccgtcaataaattcaatcgtctcaccgttacggaattt
tccgaggcactggacgcaattgaaaaagctggcgatatcaaaggcctgttgctgaccagt
ggcaaaagtgtatttatcgtcggtgcggacattaccgagtttggcggcgctttctcagcc
ggcgccgacggtatcgccgaactgatgaacaagaacaacgaaaacatcaatcgcctggaa
gacctcccgttccccaccgcggttgccatcaatggctacgccctgggtggcggttttgaa
gtgtgcctcgggtgcgatttccgcctgatgggcgacaaggccaaggtgggcctgccagag
gtgaagctgggtttgatcccggggtggggcggtaccgtacgcctgccgcgtgtggttggc
gttgatgttgccgcagagtggattgccgccggtaaagaacagcgcccggacgctgcattg
gccgcgcatgcagtggatgccgtagtgcccaccgagcaattgaaagacgcagcgctgaag
ttgctcgctcgcgccattgacggcgagctggattaccagcagcgtcgcgaaattaagaaa
tccccgatcccgctcaacgacaccgaagccctgatggccttctttaccaccaaggcattc
gttgggcagcaggcgggtcgcaattacccctccccggtaaacgcggtcacttccatcgag
cagggctacaagctcgatcgtgacgaagcgttgaaaattgagcagcagcagtttattgcc
agtgcccagaccgaaacggccacctctctcgtgggcctgttcctgaacgaccagaaggta
agcaaggtcgccaaaggctgggagaaaaagtccgacaaggaaattgagcgcgcggcagtg
ctgggcgcgggcatcatgggtggcggtatcgcctatcagtctgcctacaaaggcacgccc
atcaagatgaaggatatcaaccaggatggtatcgacctggggctgaaagaagcgggcaag
cttctcaccaagctggtcgatcgcggtcgcatgaccccggcgaaaatggctgagaccctc
aaccgtatcgaacccaccctgagctatgacggcttcagcgacgtggatatcgtggtagag
gcagtggtagaaaacccgaaagtgaaacacgccgttttgaaagaagtggagaccaaggtc
tctgaagatacggtaattgcttccaacacctccaccatttctatcgataccctggcggag
cccctgtcccgcccggaaaacttcctcggcatgcacttcttcaacccggtgcacaaaatg
ccgctggtggaagtaattcgcggtgagaagacttccgagaacgccgtcgcccgcgttgtg
gcttacgccaacaaaatgggcaagaaagcaatcgttgtgcgcgactgccccggattcctg
gtgaaccgcgtgctgttcccgtactttgccggtttcgccatgctggtgcgcgacggcgca
gacttccagcaggtggacaaggtaatggagcgctggggttggccgatgggtccggcctac
ctgatggacgtagtgggcatcgataccggtgtgcatgcagagaaagtcatggccgaaggc
ttcccggagcgtatgggcaagacattcacagcggcatccgacgtgatgtacgaagccggt
cgctacggacagaagaatggcaagggcttctacaactacgaagaagacaagaaaggtcgc
ccgaagaaagtggctacggatgaagcctacgagctcctcaagccgcacgtggctgagcgt
accgagttcgaaagcgatactgtcatcgagcgcatgatggtgcccatggctaccgaactc
gcccgctgcctggaagagggaatcgtcgattctcccgctgaagccgatatggctctggtc
tacggcattggcttcccgcccttccgcggtggcatttttgcctggctggacagcattggc
ctggataacttcgtgaaaatggccgagaagtacagcgacctgggtgagctgtacaagcct
accgaaggtatgcgcgaaatggccgccagcggcaaaacctactacggcgacaagtaa
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