Microbulbifer sp. YPW1: HUW35_14115
Help
Entry
HUW35_14115 CDS
T10374
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
micy Microbulbifer sp. YPW1
Brite
KEGG Orthology (KO) [BR:
micy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
micy01011
]
HUW35_14115
Enzymes [BR:
micy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HUW35_14115
Peptidoglycan biosynthesis and degradation proteins [BR:
micy01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HUW35_14115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_OapA
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
QKX18008
LinkDB
All DBs
Position
complement(3475508..3477076)
Genome browser
AA seq
522 aa
AA seq
DB search
MVYKKFAVAILAAAVGACAQIDSAPQTADAVQTPDIDADASEANAVSQNILAVAEPALPP
KDIWQRLRRGFTLDRQLEQPKVKDYVSYFSSNQGYMARVTERSRRYIFHVAEQLEQANVP
MEFALLPIVESAYDPFAYSHAQASGMWQFIPATGRSFGLHQNWWYDGRRDVVESTRAATE
YFNYLSAKFDGDWLLVLAAYNAGEGTVRRAIERNQRAGKGTSFWDLKLPRETRRYVPQLL
ALAEVVARPDHYRVPLHDVGNTPYYTAVNVGSQIDLAQAAELAGVEIEELYLLNPGYNRW
ATDPNGSHRLLIPSSKSARFVEALEKLPADQRVSWQRYKVARGDSLSVIARRYETTVAAI
QQTNKLRGSRIRAGQTLLIPSASGPSAQYAYSIDQRVQKRQSSGKGKKSNYTVRPGDTLW
GIARSLDVKVRELASWNNMAPGDTLRPGRQLVAYSSTSNSDSSNRTTRKVSYRVRNGDSL
YRIARKFRIDIGDIVRWNKISKGSYLQPGQRLTLFVDSASNG
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggtttataagaaatttgctgtagcgatactggctgcggcagtgggggcctgtgcacaa
attgactcggcgccacaaaccgcggatgcggtacaaacacccgatatcgatgccgacgcc
agtgaggcgaacgccgtcagtcagaatattctggcggtagccgagcccgcgctccccccg
aaggacatctggcaacgactgcgtaggggattcacccttgaccggcaacttgagcagccg
aaagtcaaagattacgtcagctacttttcctcgaaccagggctatatggcccgggtcacc
gagcgctcccgccgctacatcttccacgtagcggaacagctggagcaggccaatgtcccg
atggaattcgccctgctgcccatcgtggaaagtgcctacgacccctttgcctactcccac
gcccaggcctcaggcatgtggcaattcatcccggctaccggtcgctctttcgggctgcac
cagaactggtggtacgacggtcgccgtgacgtggtggaatccacccgcgcagctacagaa
tacttcaattacctgtccgccaaatttgatggcgactggctactggtgctcgccgcatat
aacgccggagaaggcaccgtgagacgcgccattgagcgcaatcaacgggccggtaaaggc
accagcttctgggacctcaagctacccagagagactcgtcgctacgtgccccaactgctg
gcactggcggaagtggtcgcacgcccggatcactaccgtgttcccttgcacgatgtaggc
aacacgccctactacaccgctgtaaatgtcggcagccagatagatctcgctcaggcggca
gagctcgctggagtggagattgaagaactgtatctgctcaaccccggctacaatcgctgg
gctacggaccccaatggcagccaccgcctgctgatccccagcagtaaaagtgcccgcttt
gttgaggccctggaaaaactgcctgcagatcagcgggtaagctggcaacgctacaaggtc
gccagaggagactccctctcggttatcgcccgtcgctatgaaaccaccgtggcagctatc
cagcagaccaacaaactgcgcggcagccgcattcgcgccggccagacactgctcattccc
agcgcgtccggccccagtgcgcagtacgcctattcaattgaccagcgcgtgcaaaaacgc
cagtcatccggcaaaggcaaaaaatccaattacaccgtgcgccctggggacaccctgtgg
ggtatcgcccgctccctggacgtgaaggtgcgcgagctggcaagctggaacaatatggct
cccggcgacaccctgcgcccgggacgtcagttggtggcttactcatccacgagcaacagc
gatagcagcaaccgaaccacacgcaaagtttcctatcgtgtacgcaacggggactccctg
taccgcatcgcacgcaaattccgcatcgatatcggcgatatcgtgcgctggaacaagatc
agtaaaggcagttacctgcagccaggtcagcgactgaccctattcgtagatagcgcctcc
aacggctga
DBGET
integrated database retrieval system
