Microbulbifer sp. YPW1: HUW35_14180
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Entry
HUW35_14180 CDS
T10374
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
micy Microbulbifer sp. YPW1
Pathway
micy03420
Nucleotide excision repair
micy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
micy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HUW35_14180
03430 Mismatch repair
HUW35_14180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
micy03400
]
HUW35_14180
Enzymes [BR:
micy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HUW35_14180
DNA repair and recombination proteins [BR:
micy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HUW35_14180
MMR (mismatch excision repair)
Other MMR factors
HUW35_14180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_12
Herpes_ori_bp
PLN_propep
Motif
Other DBs
NCBI-ProteinID:
QKX18019
UniProt:
A0A7H8Q0F6
LinkDB
All DBs
Position
complement(3490019..3492280)
Genome browser
AA seq
753 aa
AA seq
DB search
MSGDESHLTDEQKAIANHPGGHAKIIAVAGSGKTTALLHYIKNRLGAGIAPQDMLVLMYN
RSAKEDFSQRLKALCGNRVPAVNTFHSIGYRLYQRMIARGHLAPVNLSPLPQSLVQLQIW
KAIEACAPPDELEDIRARKQSETEAAEFFVDYTKTILTGDLSAFQQLKLGDEYLYFLKVF
RHFEDWRREQKAVTYADLIYDPAILFSMRPEVAEEYGSCYQDILVDEYQDINAVQHYLLR
VLYGKSGNVIAIGDPDQTIYEWRGSRPEFLLRLFDGDFPTSNTYQLSRTFRYGHSLSLAA
NHFIHNNRERADVFCLSGRPDAETQLHQVSTGNEGKWLVDHVRRCQKQGLPLGEIAILVR
LWSLAAPLELALLANNIPYRSGNRNTVLSRRELRPLFWSLNIAAGRFAEQTAKRRAQGLY
EWLTAPHIRIARAVLEPVCERLSQYSSGWGKQLLKLIPESLSQPQIKRLRQRAELLQQVE
KWRGHGGELVRRQLGELDYLSGIGDDAFNRQQAEEKQQTILAFCQYLDQLHQPPRETLEH
LQQLQQQHRSRDQSTSNDEDTGPAEAIQITTMHQAKGLEWDQVIIPALTVHNMPYQPQRD
FSTPASTESERRLMYVAMTRAKKQLYLLTPAQEADKGKVTSSDSEQKPSLFLDEMHLSLS
NLLGETLRTRPDNITTRVPITRLALRYLAACDYNPDINAPQAVQKKPQLGESIRHQKLGY
GRVIKWEDERVEILFSDRKTRRFDWEKLSQFLM
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgacgagtcccatctcacggatgagcaaaaggccatcgccaaccatcccggc
ggtcatgcaaaaatcattgcggtagccgggtccggcaagaccaccgccctgctccactac
atcaaaaaccggctgggagcaggcattgcgccgcaggacatgctggtactgatgtacaac
cggagtgccaaagaggacttcagccagcgcctcaaggccctgtgtggaaacagggtcccc
gcggtgaatacctttcacagtattggctaccgcctgtatcagcgcatgattgcccgcgga
cacctggccccggtcaacctcagcccgctgccgcaatcactggtacagctgcagatctgg
aaagcgattgaagcctgcgcgccgcccgatgaactcgaagatatccgcgcgcgcaagcaa
tcggagactgaggccgcagagttttttgtcgattacaccaaaaccattcttaccggtgac
ctgagcgcgtttcagcaactcaagctgggcgacgaatatctgtattttctgaaggtattc
cgtcatttcgaggactggcggcgcgaacagaaagcggtgacctacgcggacctcatttac
gaccctgcgatactgtttagcatgcggccagaagttgccgaagaatacggcagctgctac
caggatatcctggtggatgaataccaggatatcaatgcggtgcagcactacctgctgcgc
gtcctgtacggaaaatccggtaacgtaatcgccatcggtgacccggatcagaccatctac
gagtggcgcgggtcgcgcccggaatttctgttgcgcctgttcgatggggacttcccgacc
tccaacacctatcaactgagccgcacttttcgctacgggcacagcctgtccctggctgcc
aaccacttcattcacaacaaccgcgagcgcgcggacgtgttctgtctttccggcagaccc
gatgcagagacccagctgcatcaggtaagcaccggcaatgagggcaagtggctggtggat
catgtacgccgctgccagaagcaggggcttcccctcggcgaaatcgccatactggtccgc
ctctggtcactggcggcccccctggagctggcgctgctggcaaacaacattccctaccgc
tccggtaaccgcaatacggtactctcccgccgcgaattgcgcccgctgttctggagcctg
aatattgccgcgggccgatttgccgagcagactgcaaagcgtcgcgcacagggcctctat
gagtggctcaccgccccgcatattcgcatcgcccgcgcggtactcgagcctgtgtgtgaa
cgactcagccagtacagcagcggatggggcaaacagttacttaaactgattcccgaatcc
ctcagccagccgcaaatcaagcgcctgcgccagcgcgcggaactgttacagcaggtggaa
aagtggcgcggccatggcggtgaactggtgcgccgccagctgggagagctggattacctg
agcggtattggcgacgacgcattcaatcgccagcaggccgaagaaaagcaacagaccatc
ctcgcgttttgccagtatctggatcagctgcaccaacccccgagggaaaccctcgaacac
ctgcaacagctgcagcaacaacatcgcagccgggatcaatccacgagtaacgacgaggat
accgggcctgctgaagccatccagatcaccaccatgcaccaggccaaggggctggaatgg
gatcaggtaatcattccggccctgaccgtacacaacatgccctaccaaccgcagcgcgac
ttttccacgcccgcctcgacggagagcgaacgccgcctgatgtacgtggcaatgacccgg
gcgaaaaagcagttgtacctgctgaccccggcacaggaagccgataaaggcaaggtaacg
agcagtgattcggaacagaaaccgtcgctgtttctggatgaaatgcacctttcactcagc
aacctgctgggcgagacactgcgaacccgcccggacaatatcaccacccgggtgccgata
acccggcttgccctcaggtacctggctgcctgcgattacaatccggatatcaatgcaccg
caggcagtgcagaaaaaaccgcagctgggagaaagtattcgccaccagaagctgggctat
gggcgggtaatcaaatgggaggatgagcgggtggaaattctgttcagcgaccgcaaaaca
cgccgctttgattgggaaaaactcagccaattcctgatgtga
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