Microbulbifer sp. GL-2: GL2_00710
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Entry
GL2_00710 CDS
T07982
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
micz
Microbulbifer sp. GL-2
Pathway
micz03410
Base excision repair
micz03430
Mismatch repair
micz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
micz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GL2_00710
03430 Mismatch repair
GL2_00710
03440 Homologous recombination
GL2_00710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
micz03400
]
GL2_00710
DNA repair and recombination proteins [BR:
micz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GL2_00710
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GL2_00710
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GL2_00710
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BBL99996
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Position
complement(74029..75756)
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AA seq
575 aa
AA seq
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MSTRIQRRPVDFSTGRFASETPRILQRVLLGRGIVSEEALDHSLARLQKPQLMRGLDTAV
TLLVEAVRAQQKILIVGDFDADGATSSTLAVLALGAMGASSVDFLVPNRFDFGYGLTPEI
VEVAKDYAPDMLVTVDNGISSIDGVAAARAAGMTVIVTDHHLPGSELPDADAIVNPNQSD
CDFPSKNLAGVGVIFYLLSRLRTALQECGWFEQSSIVPPNMAEYLDLVALGTVADLVPLD
HNNRILVQQGIARIRSGRCRPGISALLEVAGRDQRRLSTTDIGFILGPRINAAGRLDDIG
TGIRCLLTQDPSEARELAGELDMLNRDRKAIEQGMQREALVALDALRLEGEIPWSLCLYD
ASWHQGVVGILASRIKEKFHRPVIAFAEGDNGLVKGSARSISGLHIRDALSDVAAANPEL
ISKFGGHAMAAGLSLPAENLDAFRVEFERVVRTRLDENQLQAVIDSDGGLDIAEFTLQTA
ALLRACAPWGQGFPEPVFDGEFLLLQQRIVGERHLKMVVAPPQAPQLALDAIAFNVDTDQ
WPQATQRVRLAYKLDVNEFRGRESLQLMVSLLEVA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaagaattcagcgacggccagtggatttttccactggccgttttgcttctgag
accccgcgaattttgcagagagtgttactcggacgcggcattgtcagtgaagaggcactg
gatcacagccttgccaggctgcagaagccccagctgatgcggggcctggataccgccgta
acgctgctggtagaggccgttcgggcccagcagaaaattctgatcgtcggcgactttgat
gctgatggcgctaccagcagcaccctcgccgtgctcgcgctgggggccatgggtgcatcg
agcgtagactttctcgtgcccaaccgtttcgattttggttacggcctgaccccggaaatc
gttgaggtggccaaagattatgccccggatatgctggttaccgtagataatggtatcagt
agtattgatggtgtggccgccgccagagcagcggggatgacagtgatagtgactgatcac
cacctgccgggcagtgaattgccggatgctgatgccatcgtcaaccccaaccagtcggat
tgcgattttcccagcaagaatctcgctggtgttggtgtgattttttacctgctgagtcgc
ttgcgtaccgccttgcaggagtgtggctggtttgagcagagcagtatagttccgccaaat
atggctgaatatctggacctggtggcgcttggcacggtagcggacctggtaccactagat
cacaacaaccgtattctggttcaacaaggtatagcgcgtatccgctctggccgctgccgt
cccggtatttccgcactgctcgaggtggccgggcgcgatcagcgcaggctgtccaccacc
gatatcggctttatcctggggccgcggatcaatgcagccggacgactggatgatattggt
accggcattcgctgcctgttgacccaggacccgagtgaggctcgagagctggccggggag
ctggatatgctcaaccgggatcgcaaagcgatcgagcagggaatgcagcgcgaggcgcta
gtggcgctggatgccctgcgtcttgagggggaaattccctggagcctgtgcctctacgat
gccagctggcaccagggagtagtgggtatcctcgccagccgtatcaaggaaaaatttcac
cgtccggtgattgctttcgcagaaggggataacgggctggtgaaaggctcagcgcgctcc
atttcaggtttacatatccgcgatgccctaagcgatgtggccgcagccaatccagagctg
ataagtaagtttggtggacacgccatggctgctggcttgagcttgccagcggaaaacctc
gatgcatttcgagtcgagtttgagcgagtggtgcgcacccgcctggatgaaaaccagctg
caagcggtgatcgactccgacggcggattggatattgcagagttcacactgcaaactgcc
gcccttctacgcgcctgtgcaccctgggggcagggatttcccgagccggtttttgatggg
gaatttctactactacagcagcgcatcgttggcgagcgccacctgaaaatggtggtcgct
ccgccgcaggcaccacagttggctctcgatgccatcgcctttaatgtggatacagaccaa
tggccgcaggctacccagagggtgcgtttagcctacaaactggacgtcaacgaatttcgc
gggcgggagtccctgcaattaatggtgagcctgctggaggtggcatag
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