Microbulbifer sp. GL-2: GL2_04670
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Entry
GL2_04670 CDS
T07982
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
micz
Microbulbifer sp. GL-2
Pathway
micz00521
Streptomycin biosynthesis
micz00523
Polyketide sugar unit biosynthesis
micz00525
Acarbose and validamycin biosynthesis
micz00541
Biosynthesis of various nucleotide sugars
micz01100
Metabolic pathways
micz01110
Biosynthesis of secondary metabolites
micz01250
Biosynthesis of nucleotide sugars
Module
micz_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
micz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GL2_04670 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GL2_04670 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
GL2_04670 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GL2_04670 (rfbB)
00525 Acarbose and validamycin biosynthesis
GL2_04670 (rfbB)
Enzymes [BR:
micz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GL2_04670 (rfbB)
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Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
RmlD_sub_bind
adh_short
Motif
Other DBs
NCBI-ProteinID:
BBM00393
LinkDB
All DBs
Position
complement(523827..524936)
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AA seq
369 aa
AA seq
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MKNLLVTGGAGFIGANFVHYWMKTYPQDKVFVLDALTYAGNLASLNPVKDNPGFKFYQGD
ICDTAVVETLLREHRIDILVHFAAESHVDRSISGPEAFIQTNIIGTHSLLKAVKKVWLDE
GLNKETHRFHHVSTDEVYGTLQADEPAFSETTPYAPSSPYSASKAASDHLVQAYHHTYGL
QVTTSNCSNNYGPYHFPEKLIPLVITNILQDKPLPIYGDGQQIRDWLYVEDHARGIDLVI
TKGQLGECYNIGGINEWANIDIVKLICELMNREFAENATLADKYPHALSVLEGKAQSLIT
FVEDRAGHDRRYAIDPQKSNSDLGYKPQESFETGIQKTLQWYLRNDDWWTAVMDGSYRQW
IEQQYSTAG
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacttactggtaactggtggagctggttttataggtgccaactttgtgcactac
tggatgaaaacttatccacaggataaagttttcgtgctggatgcacttacttatgcgggc
aatctcgctagcttgaatccagtaaaggacaatccgggttttaagttttatcagggagat
atttgtgatactgcagtggtagagaccctacttagggagcatcgtatagacatattggtg
cattttgctgcagaaagtcatgtggatcgctccattagtgggcccgaagcatttattcag
acaaatattattggtacccatagtttactcaaagcggttaaaaaagtatggcttgatgag
ggccttaataaggagactcatcgtttccatcatgtctcaacagatgaagtgtatggcacc
ctgcaagcggatgaaccagcatttagcgaaactactccatacgcacccagtagcccttac
tcagccagtaaggctgcatctgatcacttggtgcaagcttaccaccatacttatggattg
caggtaaccaccagcaactgctcgaacaattatggaccctatcattttccggaaaaactg
atcccactagtgatcaccaatatcctgcaggacaaaccactgccgatctacggtgatggc
caacaaattcgagactggctttatgtagaagatcacgcacgaggtatcgacctggtgatt
acaaaggggcagctgggggagtgttataacatcggtggaattaatgaatgggccaatatc
gacattgtcaaattaatctgcgagctgatgaatcgagagtttgcagaaaacgccacactc
gctgacaagtacccacatgccttatccgtcctggaagggaaagctcagagcttaattact
tttgtggaggatagagcgggtcacgaccgccgttatgccattgatccgcaaaagtctaat
agcgatcttggatataagccgcaggaaagttttgagactggcatccaaaaaacactgcag
tggtacttgagaaatgatgactggtggacagcagtgatggacggtagttatcgacagtgg
atagagcagcaatacagcaccgccggataa
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