Microbulbifer sp. GL-2: GL2_11390
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Entry
GL2_11390 CDS
T07982
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
micz
Microbulbifer sp. GL-2
Pathway
micz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
micz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GL2_11390 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
micz03021
]
GL2_11390 (rho)
03019 Messenger RNA biogenesis [BR:
micz03019
]
GL2_11390 (rho)
Transcription machinery [BR:
micz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GL2_11390 (rho)
Messenger RNA biogenesis [BR:
micz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GL2_11390 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
AAA_22
NACHT
S1CSD-TOTE-2
Mor
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
BBM01065
LinkDB
All DBs
Position
complement(1309791..1311050)
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AA seq
419 aa
AA seq
DB search
MNLSELKTKPIEELIEIAKGMGLENLARSRKQDIIFNILKRHAKSGEDIYGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDSISGKIRPPKEGERYFALLKVNEIN
FDKPENARNKILFENLTPLFPNERLGLECGNGSSEDLIGRIIDLVAPIGKGQRGLIVAPP
KAGKTIMLQNMAQAITRNNPECHLIVLLIDERPEEVTEMQRSVRGEVVASTFDEPPARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTTVPSSGKVLTGGVDAHALERPKRF
FGAARNIEEGGSLSIIATALIDTGSKMDEVIFEEFKGTGNMELQLDRKIAEKRVYPAINV
RRSGTRREELLMPEGELQRVWILRKLLHDMEDVASTEFLVDKLKDFKTNDEFFLSMKRK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctctccgaattaaaaaccaaacccattgaagagttgattgaaatagccaaaggt
atgggcctggaaaacctggcccggtcgcgcaaacaggatattattttcaatattctcaag
cgccatgccaaaagcggtgaagatatttacggcgacggtgtactggaaatccttcaggac
ggttttggatttttgcgttccgctgattcctcttatcttgcgggaccggacgatatatac
gtttctcccagccagattcgccgttttaatttgcgtacgggtgactcgatttccggaaag
attcgaccaccaaaagaaggtgagagatatttcgcacttttgaaagttaacgaaattaat
ttcgataagccggaaaatgcccgtaacaaaattcttttcgaaaacctcacacctcttttc
cccaatgaacgcctcggtctggaatgtggcaatggctcttccgaagacttgatcggtcga
attattgacctggtggctccgattggtaaggggcagcgtggcctgatcgtagctccgccc
aaggcgggtaaaactattatgctgcagaatatggcccaggccataacgcgcaataatcct
gaatgtcatctgatcgttttgctgattgacgagcgcccggaagaagtgactgagatgcag
cgctcagtacgcggtgaagtggttgcctccacttttgatgagccgcccgcacgccacgtc
caagttgctgaaatggtgattgagaaagccaagcgtctggtggaacacaaaaaagatgta
gtgatcctgttggattccattacccgtttggcgcgtgcttataacactacggtgccgagt
tctggcaaggtactaactggtggtgtggatgcccacgccttggagcgccccaagcgcttc
tttggtgccgcgcgcaatattgaagaaggcggaagtctgtctattattgctactgcactg
attgatactggctcgaagatggatgaagtaattttcgaggagtttaaaggtacaggtaac
atggaattacagctggatcgtaagatcgctgaaaaacgtgtttacccggcaattaatgta
cgtcgctcgggtacccgccgtgaagagttgttaatgcctgagggtgagctgcagcgggta
tggattttacgtaaacttttgcacgatatggaagatgtggcgtcaactgaattcctagtg
gataagttgaaggatttcaagactaatgacgaattcttcctgtccatgaaacggaaataa
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