Microbulbifer sp. GL-2: GL2_18480
Help
Entry
GL2_18480 CDS
T07982
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
micz
Microbulbifer sp. GL-2
Brite
KEGG Orthology (KO) [BR:
micz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
micz03009
]
GL2_18480 (rlmD)
Enzymes [BR:
micz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
GL2_18480 (rlmD)
Ribosome biogenesis [BR:
micz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GL2_18480 (rlmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
TRM5-TYW2_MTfase
Methyltr_RsmB-F
Cons_hypoth95
MTS
PCMT
RrnaAD
Methyltransf_15
PabTrmU54_TRAM_dom
Methyltransf_23
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
BBM01774
LinkDB
All DBs
Position
2085166..2086530
Genome browser
AA seq
454 aa
AA seq
DB search
MSKKPRFITSRKPAKKTLPAEVEVSVEKFSHDMRGIARVAGKTVFIDNALPGEKVHFRYN
TRRARFDEGTAVDILQASPQRCVPRCPHVDLCGGCSIQHLQTREQIAEKQKILLDQLFRF
GSITPGDILPPLVAESYGYRRRARIGIRQLKSRKGRELIFGFRKKRSNDLTDINECHVLH
PAIAGRIPQLKKLVADCDGRMHFSQLDVAVGDDVVALVLRHLRPLADSDRERWVAFAKSA
GIHMYIQAADADSAQRLWPREGEAFLSYQLPEFDLTLRFQPADFVQVNFEINRQMVSHAL
QLLDPQSYERVLDLFCGLGNFTLPLARRAGEVVGVEGQGVLTRRGVENAALNNLDNVQFH
AADLNEEIANQAWAKGGFDKILLDPPRSGALQVVRGIARFEAKKIVYISCNPATLARDAG
ELAQFGYRLSQAGVMDMFPHTDHVESMAVFERES
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaaccgcgttttattacttcgcgtaaaccggcaaaaaaaacactgccagcc
gaggtcgaagtcagcgtagagaaattcagccacgatatgcgcggtatcgcccgtgttgcc
ggtaaaacagtatttattgataacgccctgccgggggaaaaagtgcattttcgctacaac
actcgtcgtgcccgctttgatgagggcactgctgttgatattttgcaggcttcaccacag
cgctgcgtaccacgctgtccccatgtagatctctgtggtggctgctcaatacagcatcta
caaacgcgtgaacaaattgccgaaaagcaaaaaatattattggatcaactcttccgtttt
ggaagtattacgccgggggatatattgccgccactggtcgccgaatcctatggttatcga
cgcagagcacgtatcggaattcgccagttgaaatcccgcaagggcagggagttgattttt
ggatttcgtaaaaaacgcagcaatgatttgactgatatcaatgagtgccatgtgttgcac
ccggcaattgccgggcggataccacaattgaaaaaactggtggctgactgcgatggccga
atgcacttttcacagctggatgtggcggtgggggatgatgtggtggcactggtactgcgt
catttacgaccattggcggatagtgatagagagcgctgggtggcctttgctaaaagtgca
ggtatacacatgtatatacaggctgctgatgccgactccgctcaacgcttgtggccccgg
gaaggggaggcttttctcagctatcaactgcctgaatttgatctgaccctgcgctttcag
ccagcagattttgtccaggttaatttcgaaattaatcgccaaatggtgagtcatgcactg
cagctgctggacccgcaatcctatgagcgggtactggatcttttctgtggcttggggaat
ttcaccctcccgctggcgcgacgtgcgggtgaagtggtcggggttgaaggccagggcgtg
ctcacccgccggggagtggagaatgctgcacttaataatttggataatgtgcaatttcac
gcagcagatctgaatgaagaaatagcaaatcaagcctgggccaagggcggtttcgataaa
atcctgttggaccctccgcgtagtggtgcactgcaggtggtgcgaggtatcgcgcgcttt
gaagcaaagaaaattgtctatatctcctgtaatccggccaccctcgcacgggatgccggg
gagctggcacagttcggctatcgcctgagtcaggctggggtgatggatatgttcccccat
accgatcatgtcgagtccatggcggtttttgaacgggaatcctga
DBGET
integrated database retrieval system
