Microbulbifer sp. GL-2: GL2_21610
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Entry
GL2_21610 CDS
T07982
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
micz
Microbulbifer sp. GL-2
Pathway
micz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
micz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GL2_21610 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
micz03019
]
GL2_21610 (pnp)
03016 Transfer RNA biogenesis [BR:
micz03016
]
GL2_21610 (pnp)
Enzymes [BR:
micz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GL2_21610 (pnp)
Messenger RNA biogenesis [BR:
micz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GL2_21610 (pnp)
Transfer RNA biogenesis [BR:
micz03016
]
Prokaryotic type
tRNA degradation factors
GL2_21610 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
KH_2
S1_RRP5
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
BBM02087
LinkDB
All DBs
Position
2448168..2450291
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AA seq
707 aa
AA seq
DB search
MNPVSKTFQYGQHQVTIETGRIARQATGAALVTMGETVVLCTVVGAKEAKPDQGFFPLSV
HYQEKAYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPKGFMNEVQVMITVLSAE
KDVDPDIAGMIGTSAALSVSGIPFAGPIGAARVGYTQKDGYLLNPGYEALKTSELDMVVA
GTKDAVLMVESEAKELPEDIMLGAVLYAHQEMQAVVKVCEELKAEAGKPQWNWQPEAENT
ELKAALESQFGTKVAEAYRITDKQQRTARLNELRNEAADALASEEVDAGDVKSYFGKLEK
KTVRGAVVRGEPRIDGRDTKTVRPINVEVGVLPKGHGSSLFTRGETQALVVATLGATRDA
QIIDALEGERKDYFMLHYNFPPYSVGEAGRVGATGRREIGHGRLARRGIAAVLPDPESFP
YTLRVVSEITESNGSSSMASVCGSSLALMDAGVPLKAPVAGIAMGLVKEEEGYAVLTDIL
GDEDHLGDMDFKVAGTASGVTALQMDIKIEGITEEIMETALEQALHARLHILVEMNKLIG
ESRSSVNENAPRFATLKIHPDKIRDVIGKGGATIRSITEETGASIDIEDDGSIKVFGEDG
ESLEAAVTRIEEITAEAEIGAIYEGTVVRIVDFGAFVNFLPGKDGLVHISQIAEERVNAV
TDYLSEGQKVFVKVLDVDQRGRIKLSIKEAKADQAASAEEKQGSEEA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccagtaagcaaaactttccagtacggacaacaccaagtcactatcgaaactggc
cgcattgcacgccaggcgacgggtgcagccttggtcactatgggtgaaaccgttgttctg
tgtaccgttgtaggtgccaaagaagccaagcctgatcagggctttttccctctgtccgtg
cattaccaggaaaaagcctacgcggctggcaaaattcccggcggcttcttcaagcgtgaa
ggtcgcccatctgaaaaagaaactttgacttcgcgcctgatcgatcgcccgatccgtccc
ctgttccccaagggcttcatgaatgaagtgcaggtgatgatcactgtcctgtctgcagag
aaggacgtggatccagatattgccggcatgatcggcacctccgcagctctgtccgtttcc
ggtattccttttgcgggcccaattggcgctgcgcgcgtaggctatacccaaaaagatggc
tacctgctgaacccgggttacgaagctctgaaaacctctgagctggatatggtggttgcg
ggcactaaagatgctgtgttgatggttgaatcggaagcgaaagagctgccggaagatatc
atgctgggtgcagtactctatgcgcaccaggaaatgcaggcggtagtaaaagtctgtgaa
gagttgaaagctgaagctggcaagccccagtggaactggcaaccggaagcagaaaacacc
gagctgaaagcggccctggaaagccagtttggtaccaaggtagccgaagcttaccgtatc
actgacaagcagcagcgcaccgctcgcttgaacgagttgcgcaatgaagcggctgatgcc
ctggcgagcgaagaagttgatgccggtgatgtaaaaagctacttcggcaagctcgaaaag
aaaacggttcgtggtgcagtagtgcgtggcgaaccgcgtattgatggtcgcgataccaag
actgtacgcccgattaatgtagaagttggcgtattgccgaagggccatggctcctccctg
ttcacccgtggtgaaactcaggcactggttgttgccactctcggtgctacccgcgatgcg
cagattatcgatgccctggaaggcgagcgtaaagattactttatgctgcattacaacttc
cctccctactccgtaggcgaagcgggtcgtgtgggtgctaccggtcgccgtgaaatcggc
catggtcgtctggcccgtcgcggtatcgctgccgttctgcctgatccggagagcttccct
tacactctacgggtggtttctgaaatcaccgagtccaacggttccagctccatggcttcc
gtgtgtggctccagtcttgcgctgatggatgcaggtgtacccttgaaggcaccggttgcc
ggtatcgccatgggcctggtgaaggaagaggaaggctatgcagtcctgaccgatatcctc
ggtgatgaagatcacctgggtgatatggactttaaggttgccggtaccgcttctggtgtg
actgccctgcagatggatatcaagatcgagggtatcactgaagagatcatggaaactgcg
ctggagcaggctctgcacgcgcgtttgcatatcctcgtggaaatgaacaagctgatcggc
gagtcccgttccagtgtgaacgagaatgctccgcgtttcgcaaccctgaagatccacccg
gacaagattcgcgacgttatcggtaagggcggcgcaactatccgctctatcaccgaagaa
actggcgcgtccatcgatattgaagatgacggcagcattaaggtcttcggcgaagacggt
gagagcctcgaagctgcggttacccgtatcgaggaaatcactgcggaagccgagatcggc
gcaatctacgagggcaccgtggtacgcatcgtggacttcggcgcgttcgtcaacttcctg
ccgggcaaagatggcctggtgcatatctcccagatcgctgaagagcgtgtcaacgcggta
actgactacctgagcgaaggccagaaggtgttcgtgaaggtgctcgacgtggaccagcgc
ggacgtatcaagctctccatcaaggaagccaaggccgaccaggctgcttccgcagaggag
aaacagggttccgaagaggcgtaa
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