Microbulbifer sp. GL-2: GL2_22740
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Entry
GL2_22740 CDS
T07982
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
micz
Microbulbifer sp. GL-2
Pathway
micz03030
DNA replication
micz03430
Mismatch repair
micz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
micz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GL2_22740 (holA)
03430 Mismatch repair
GL2_22740 (holA)
03440 Homologous recombination
GL2_22740 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
micz03032
]
GL2_22740 (holA)
03400 DNA repair and recombination proteins [BR:
micz03400
]
GL2_22740 (holA)
Enzymes [BR:
micz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GL2_22740 (holA)
DNA replication proteins [BR:
micz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GL2_22740 (holA)
DNA repair and recombination proteins [BR:
micz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GL2_22740 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
BBM02200
LinkDB
All DBs
Position
complement(2578541..2579545)
Genome browser
AA seq
334 aa
AA seq
DB search
MRINPQQLQQNLNKGLAPVYIISGDEPLLVQECCDQIRVAARKSGFEERELLHAEHNFDW
GLLLASAGNMSLFAQKKLIEVRAPGGKPGDKGSKALQEFTALSSQDLVLLLILPKLDRSQ
LNSKWVKTLEKEGVLIQVWPVTAQEMPRWINQRLSASGLTAEPEAIQILAERVEGNLLAA
SQEIEKLKLLNNNKPITVDVLENSVTSSARYSVFDLIDRALAGEANKAVRTLQGLRTEGI
EPPVVLWALAREIRSLLEIGEKLNQGQPLARLVRIQKRQPLIQSALSRLPTRQLETLLLR
ARTIDTAIKGGAGQQSPWTGLLELTLNLSGQRSV
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattaacccccagcagctacaacagaaccttaataaaggactggcaccggtttat
attatttcgggagatgagcccctgctggtccaggagtgttgcgaccagattcgcgtggcg
gcaagaaagtccggttttgaagagcgtgaacttttacatgccgagcacaattttgattgg
gggctgctccttgcctctgcaggcaatatgtccctatttgcccagaaaaagctgattgaa
gtgcgcgcacctggaggcaaaccaggagacaaaggcagtaaggcactacaggaatttact
gctctgtccagccaggatctagtcctgctgctgattcttcccaaactggacaggtcccaa
ctcaatagtaaatgggtgaagaccctggaaaaagagggggtgctaattcaggtctggccg
gtaactgcacaggaaatgccgcgctggatcaaccagcgactcagtgcttccggccttaca
gctgaacccgaggcaatacaaatcctggcagagcgagtggagggtaatctgcttgccgcg
agtcaggaaatagaaaaacttaagctgctaaacaacaataaacccattactgtcgacgta
ctggagaatagcgttaccagctccgcccgctacagtgtttttgatcttatagatcgggcc
ttggctggagaagccaacaaagcggtaagaactttacagggattgcgtaccgagggcatt
gaaccgccagtagtactttgggccctggctcgggaaatccgctcattattggaaattggg
gaaaaactcaatcagggccaacccctggctcgcttggtgcgtatccaaaaacgtcaacca
ctgattcaatcagccctttccagattaccaacccgccagcttgaaacactgcttttgagg
gctcgcactatcgacacagcgattaaaggcggagccgggcagcaatcaccctggaccggg
ctactggaacttaccttgaatttaagtggtcaacgtagtgtttag
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