Microbulbifer sp. GL-2: GL2_23410
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Entry
GL2_23410 CDS
T07982
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
micz
Microbulbifer sp. GL-2
Pathway
micz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
micz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GL2_23410 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
micz03019
]
GL2_23410 (rhlB)
Enzymes [BR:
micz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GL2_23410 (rhlB)
Messenger RNA biogenesis [BR:
micz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GL2_23410 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BBM02267
UniProt:
A0A510IXW7
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All DBs
Position
2651632..2653143
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AA seq
503 aa
AA seq
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MFRRSSSNEDKSPRQGDERSKRRKDDQNPTDRASKGQSARGKSGQGEGNSRRSSGKASHK
GRYRNRKPKAEMAATPWSIEEFQVHAEEGKVRFHDLGLPLELMRGIHDLGFQYCSPIQGR
SLPHTLNGHDLVGKAQTGTGKTAAFLITVIEDLLRHPFEGERYAGEARSLIIAPTRELVM
QIADDAKALCKYTDLEIHTLVGGMDYDKQQRNLNERLVDILVATPGRLLDFVGNRDCYLD
QVEVLVIDEADRMLDMGFIPQVRRIVRQTPRKTHRQTMFFSATFTPEVDSLVEQWTDDPV
IVEIEPERVATDSVEQHVYLAASEEKYTLLYNILQREDVDSLIVFANRRDQCRRLHEHLI
AHGISAGLLSGEVAQNKRVRTLDDFKSGKTKVLVATDVAGRGIHIDGISHVVNFTLPEEP
EDYVHRIGRTGRAGKTGTSISFACEDDSMRLEPIEQLLGGKLKCEVPPEELLVEPPRVKV
QRSHHDNRGGRHSSGGNRRPRRH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttgttccgtcgttcctcctccaatgaggacaagagcccccgccagggagacgagcgctcc
aagcgccgtaaagacgaccagaacccgactgatcgggcctcaaaaggccaatccgctcgg
ggtaaatctggtcaaggcgaggggaattcgcgccggagcagcggcaaagcttcccacaag
ggccgctaccgcaatcgtaagccaaaggcggaaatggcggccactccctggtctattgag
gagttccaggttcacgcggaggagggcaaggttcgcttccatgacctgggtctgcctctg
gagttgatgcggggtattcacgatctcggcttccagtactgctcgcctatccaggggcgc
tcactgccccacacgctgaatggtcacgacctggtgggcaaggcccagacgggcacaggt
aagacagctgctttcctgatcactgtaattgaagacttgttgcgccacccttttgagggg
gagcgctacgctggtgaggcccgctcactgattattgctcctacgcgtgagctggtgatg
cagatcgccgacgacgctaaagctctatgtaagtacaccgacctggaaatacatactctg
gttggcggtatggattacgacaagcagcaacgcaatctgaatgagcgcttggtagatatt
ctggttgctacaccggggcgcctgctggactttgtcggcaatcgtgattgctatctggat
caggtagaagtccttgtgattgatgaagcggaccgtatgttggatatgggctttatcccc
caggtgcgccggatcgtgcgtcaaaccccccgcaaaacccaccgccaaacaatgttcttt
tctgcgaccttcactccagaggtcgactcccttgttgaacagtggacggatgatccggtg
attgtggaaattgagcctgagcgtgttgccaccgacagtgtggagcaacatgtttacttg
gctgccagcgaagaaaaatatacgttgctttacaacatcttgcagcgtgaagatgtggac
agcctgatcgtgtttgccaaccgccgcgaccagtgccgacgtttgcacgagcaccttatc
gcccatggtatttccgccggcctgctatccggggaagtcgctcagaataagcgtgtgcgt
accctggatgacttcaaatcaggaaaaaccaaagtattggtagcaactgatgttgccggc
cgtggaatccatatcgatggtatcagtcatgtggtcaacttcaccctgccggaggagccg
gaagattacgttcaccgcataggccgtacaggtcgtgccggtaaaaccggtacttctatc
agctttgcctgtgaagatgattctatgcgacttgagccgattgaacagttgctgggtgga
aagcttaagtgtgaggtgccgcctgaggagttgctggtggaacccccgcgagtgaaagtg
cagcgtagtcaccatgataatagaggtgggcgccatagcagtggcggcaaccgccggccc
cgccgccactaa
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