Mycobacterium intracellulare subsp. intracellulare: MIP_01560
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Entry
MIP_01560 CDS
T02325
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mid
Mycobacterium intracellulare subsp. intracellulare
Pathway
mid03420
Nucleotide excision repair
mid03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MIP_01560
03430 Mismatch repair
MIP_01560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mid03400
]
MIP_01560
Enzymes [BR:
mid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MIP_01560
DNA repair and recombination proteins [BR:
mid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MIP_01560
MMR (mismatch excision repair)
Other MMR factors
MIP_01560
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
DEAD
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
AFS13077
LinkDB
All DBs
Position
1100812..1103148
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AA seq
778 aa
AA seq
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MHATDTKPASEADQLLEGLNPQQRQAVVHEGSPLLIVAGAGSGKTAVLTRRIAYLIAARG
VGVGQVLAITFTNKAAAEMRERVVRLVGNRARAMWVSTFHSTCVRILRNQASLIEGLNSN
FSIYDADDSRRLLQMIGRDMGLDIKRYSPRLLANAISNLKNELIDPADAVSKLTDDSDEL
SRTVASVYGEYQRRLRAANALDFDDLIGETVAVLRAFPQIAQHYRRRFRHVLVDEYQDTN
HAQYVLVRELVGRGGTEAPASSDDVPPAELCVVGDADQSIYAFRGATIRNIEDFERDYPD
ATTILLEQNYRSTQNILSAANSVIARNSGRRDKRLWTAEGAGELIVGYVADNEHDEARFV
AEEIDALADKGEITYNDVAVFYRTNNSSRSLEEVFIRAGIPYKVVGGVRFYERKEIRDIV
AYLRVLDNPGDAVSMRRILNTPRRGIGDRAEACVAVYAENTGASFADALVAAAEGKVPML
NSRAEKAIAGFVELLDELRGRLDDDLGDLVESVLERTGYRRELESSSDPQELARLDNLNE
LVSVAHEFSTDRANADALDESLHTPEDEDVPDTGVLAEFLERVSLVSDSDEIPEDGAGMV
TLMTLHTAKGLEFPVVFVTGWEDGMFPHMRSLDDPTELSEERRLAYVGITRARQRLYVSR
AIVRSSWGQPVLNPESRFLREIPQELIDWRRTAPAPSFSAPVSGAGRFGTPRAAPTRSGM
SKRPLLVLEPGDRVTHDKYGLGRVEEVSGVGESAMSLIDFGSSGRVKLMHNHAPLSKL
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgcaacagataccaagccggcctcggaagccgatcaactgctcgaggggctcaac
ccgcaacagcgccaggcggtggtgcacgagggctccccgctgctgatcgtcgccggggcg
ggttcgggcaagaccgcggtgttgacgcgtcgcatcgcctacctgatcgcggcccgcggc
gtgggggtcggccaggtgctggcgatcaccttcaccaacaaggccgcggccgagatgcgg
gagcgggtggtgcggctggtcggtaaccgggcccgcgccatgtgggtgtccacctttcac
tcgacctgcgtgcgcatcctgcgcaaccaggcgtccctgatcgaaggcctcaactccaac
ttttcgatctacgacgccgacgattcgcggcggctgttgcagatgatcgggcgcgacatg
ggcctcgacatcaagcgctactcgccgcggctgttggccaacgccatctccaacctgaag
aacgagctgatcgaccccgccgacgcggtctccaagctgaccgacgattccgacgagttg
tcgcgcacggtggcgagcgtctacggcgagtatcagcgccggctgcgggcggcgaacgcg
ctggacttcgacgacctgatcggggaaaccgtggcggtgttgcgggctttcccgcagatc
gcccagcattaccggcggcggttccggcatgtgctcgtcgacgagtaccaggacaccaac
cacgcccagtacgtgctggtgcgggaactggtgggccgcggcggcacagaagcaccggca
tcgtccgacgatgtgccgcccgccgagttgtgcgtggtcggcgacgccgaccagtcgatc
tatgcgttccgcggcgccaccatccgcaacatcgaggacttcgaacgcgactaccccgac
gcgacaaccattctgctggaacagaattaccggtcgacgcagaacattttgtcggcggcc
aactccgtgatcgcccgcaattccgggcgccgggacaaacgcctgtggaccgccgaaggc
gccggcgaattgatcgtcggctacgtcgccgacaacgagcacgacgaggccagattcgtc
gccgaggagatcgacgcactcgccgacaagggcgagatcacctacaacgacgtcgccgtc
ttctatcgcaccaacaactcgtcgcggtcgttggaagaggtcttcatccgcgccgggatt
ccgtacaaagtcgttgggggagtgcggttttacgagcgcaaggagattcgcgacattgtc
gcctatctgcgggtgctggacaaccccggggatgcggtcagcatgcggcgcatcctcaat
accccgcgacggggcatcggagatcgcgccgaggcttgcgtggcggtgtacgccgagaac
accggggccagcttcgccgacgcactcgtcgccgcggccgaaggcaaagtgccgatgctg
aattcccgcgcggagaaggcgatcgcgggtttcgtcgagcttctcgacgagctgcgcggc
cgcctggatgacgatctcggggatctcgtcgagtctgtgctcgaacgcaccgggtaccgc
agggagctggaatcctccagcgatccccaggaactggcgcggttggacaacctcaacgaa
ctcgtcagtgtcgcacacgaattcagtaccgaccgggcgaacgccgacgcgctggacgag
tcgctgcacacgcccgaagacgaggacgtgccggataccggtgtgctggcggagttcttg
gaaagggtgtcgctggtttccgacagcgacgaaatccccgaggacggcgccggcatggtc
acgctgatgaccctgcacaccgcgaaaggcctcgagtttccggtggtgttcgtcaccggg
tgggaggacgggatgttcccccacatgcggtcattggacgacccgaccgaactctccgag
gagcggcgcctggcctacgtgggcatcacccgggcccggcaacggctgtacgtgagcagg
gccattgtccgctcctcctggggacagcccgtgctcaacccggaatcccgtttcctcaga
gagattccgcaagaattgatcgattggcgccgcaccgcgccggccccgtcgtttagcgcg
ccggtgagtggtgccggacgcttcggtacgccgcgcgcggcgcccactcgatccgggatg
agcaaacgaccgctcctggtgctcgagcccggcgaccgggtgacgcacgacaagtacggc
ctgggccgggtcgaggaagtttcgggtgtcggcgaatcggcgatgtcgctgatcgacttc
ggtagctcgggtcgggtgaagctgatgcacaaccacgccccgctcagtaagctctag
DBGET
integrated database retrieval system
