KEGG   Mycobacterium intracellulare subsp. intracellulare: MIP_03804
Entry
MIP_03804         CDS       T02325                                 
Name
(GenBank) RNA polymerase sigma-F factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
mid  Mycobacterium intracellulare subsp. intracellulare
Brite
KEGG Orthology (KO) [BR:mid00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mid03021]
    MIP_03804
Transcription machinery [BR:mid03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MIP_03804
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_3 HTH_23 HTH_Crp_2 Sigma70_ECF MarR_2 MarR HTH_24 DUF7343 HTH_Tnp_4 GerE DUF134 KORA HTH_Tnp_ISL3 DUF1492 LacI HTH_7 HTH_ParB Trp_repressor HVO_A0261_N HTH_31
Other DBs
NCBI-ProteinID: AFS14613
UniProt: J9WEL4
LinkDB
Position
complement(2797642..2798370)
AA seq 242 aa
MFVALHRMPAESHEYARQREYIVARCLPLADHVASHFARRGEGLEDLIQVARLGLMNAVN
RFDPAKGPSFIGFAVPTMMGEVRRYFRDYSWGMRVPRRLRELHVQISRATADLAQQLGRA
PNAGELSQMLEVPREEIVECLVAGDAYRLDSLDAPLGADSSGTPRSVADSVGDIDPQIEH
ITNREALRALVATLPPRERDVLRMRFFESMTQSQIAERIGVSQMQVSRILANTLRCLRDQ
LE
NT seq 729 nt   +upstreamnt  +downstreamnt
atgttcgtggcgctgcatcgcatgccggccgagtcgcacgagtacgcccgccagcgcgaa
tacatcgtcgcccgctgcctgccgctggccgaccacgtggccagccacttcgcccgccgg
ggcgagggtctcgaggacttgattcaggtcgcacgcctgggcttgatgaacgccgtcaac
cggttcgaccccgcgaagggccccagcttcatcggtttcgccgtccccaccatgatgggc
gaggtccggcgttatttccgcgactacagctgggggatgcgtgtcccgcggcggttgcgc
gaactgcacgtgcagatcagcagggcgaccgccgatctcgcccagcagctcgggcgcgca
cccaacgcgggcgaactgtcgcagatgctcgaggttccgcgggaggagatcgtcgaatgc
ctcgtcgccggcgatgcctaccggctcgattccctcgacgcaccgctgggcgccgatagt
tccggaacgccgcgctcggtggccgactcggtgggcgacatcgatccgcagatcgagcac
atcaccaatcgcgaggcgctgcgggccctcgttgccaccctgccgccgcgcgaacgcgac
gtcttgcgcatgcggttcttcgaatcgatgacgcaaagccagatcgcggagcggatcggg
gtgtcgcagatgcaggtctcgcgcatcctggcaaacacgctgcgctgcctgcgcgaccaa
ctcgagtag

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