Mycobacterium intracellulare subsp. intracellulare: MIP_04397
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Entry
MIP_04397 CDS
T02325
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
mid
Mycobacterium intracellulare subsp. intracellulare
Pathway
mid03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MIP_04397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mid03400
]
MIP_04397
DNA repair and recombination proteins [BR:
mid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MIP_04397
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MIP_04397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_22
AAA_16
AAA_19
AAA_5
DUF87
AAA_30
Glyco_trans_4_4
Helicase_RecD
HEM4
AIG1
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AFS14995
UniProt:
J9WDA9
LinkDB
All DBs
Position
complement(3256552..3258729)
Genome browser
AA seq
725 aa
AA seq
DB search
MAFATEHPVVAHSEYRPAEEAVAGLVRAGGRFEVVSPHDPAGDQPAAIDELERRIRAGER
DVVLLGATGTGKSATTAWLIERLQRPTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYY
DYYQPEAYIAQTDTYIEKDSSINDDVERLRHSATSSLLSRRDVVVVASVSCIYGLGTPQS
YLDRSVELRVGNEVPRDGLLRLLVDVQYTRNDLSFTRGSFRVRGDTVEIIPSYEELAVRI
EFFGDEIEALYYLHPLTGDVIRQVDSLRIFPATHYVAGPERMAHAISTIEEELAARLAEL
EGQGKLLEAQRLRMRTNYDIEMMRQVGFCSGIENYSRHIDARGPGSPPATLLDYFPEDFL
MVIDESHVTVPQIGGMYEGDMSRKRNLVEYGFRLPSACDNRPLTWEEFADRVGQTVYLSA
TPGPYELSQSGGEFVEQVIRPTGLVDPKVVVKPTKGQIDDLIGEIRKRTDADQRVLVTTL
TKKMAEDLTDYLLEMGIRVRYLHSEVDTLRRVELLRQLRLGEYDVLVGINLLREGLDLPE
VSLVAILDADKEGFLRSSRSLIQTIGRAARNVSGEVHMYADTITDSMKEAIDETERRRAK
QIAYNEANGIDPQPLRKKIADILDQVYREASDTEASVVEIGGSGRNASRGRRAQGEPGRA
VSAGVFEGRDTTSMPRAELADLIKDLTAQMMAAARDLQFELAARFRDEIADLKKELRGMD
AAGLK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcattcgccacggaacatccggtagtcgctcattcggaatatcgcccggccgaagag
gccgtggcggggctggtgcgcgccggcggccgcttcgaggtcgtcagcccgcacgacccc
gccggggaccagccggcggccatcgacgagctggagcgcaggatcagggcgggggagcgc
gatgtggtgctgctcggcgccaccggcaccgggaagtcggccaccaccgcctggctcatc
gagcgcctgcagcggcccaccctggtgatggcacccaacaagacgctggccgcccagctg
gccaacgagctgcgggagatgttgccgcacaacgccgttgagtacttcgtgtcgtactac
gactactaccagcccgaggcctacatcgcgcagaccgacacctacatcgaaaaggacagc
tcgatcaacgacgacgtcgagcgcttgcggcactccgcgacgtcgtcgctgctgtcgcgg
cgcgacgtggtcgtggtggcgtcggtgtcgtgcatctacggcctgggcaccccgcagtcg
tacctggatcgctcggtggaactgcgggtcggcaacgaggtgccccgggacgggttgctg
cggctactggtcgacgtccagtacacccgcaacgacctgtccttcacccgcggctcgttc
cgggtgcgcggcgacaccgtggagatcatcccgtcctacgaagaactggcagtgcgcatc
gagttcttcggcgacgagatcgaggcgctgtattacctgcacccactgacgggcgacgtg
atccgccaggtcgactcgctgcgcatcttcccggccacccactacgtggccggccccgag
cggatggcccacgccatctcgacgatcgaagaggaactggccgcccggctggccgaactc
gagggccagggcaagctgctcgaggcgcagcgcctgaggatgcgcaccaactacgacatc
gagatgatgcgccaggtcggattctgctcgggcatcgagaactactcccgccacatcgac
gcccgggggccgggctcgccgccggcgaccctgctcgactacttcccggaagacttcttg
atggtcatcgacgagtcgcacgtcaccgtgccgcagatcggcggcatgtacgagggcgac
atgtcgcgcaagcgcaacctggtcgaatacgggttccggttgccatcggcgtgcgataac
cgcccgctgacgtgggaggagttcgccgaccgggtcgggcagacggtgtatctgtcggcc
accccgggcccctatgagctcagtcagtccggcggcgagttcgtcgagcaggtcatccgg
cccaccggcctggtggacccgaaggtggtggtcaaaccgaccaaggggcagatcgacgac
ctgatcggcgagatccgcaagcgcaccgacgccgaccagcgggtgctggtcaccacgctc
accaagaagatggccgaggacctcaccgactacctgctcgagatgggcatccgggtgcgc
tatctgcactcggaggtcgacacgctgcgccgggtcgaattgctgcgccagctgcggctc
ggggagtacgacgtgctggtcggcatcaacctgctgcgcgagggcctggacctgccggag
gtgtcgctcgtcgccatcctggacgccgacaaagagggtttcctgcggtcatcgcgcagc
ctgatccaaaccatcggccgcgccgcccgcaacgtctccggcgaagtgcacatgtacgcc
gacacgatcaccgactcgatgaaggaagccatcgacgagaccgaacggcgccgggcgaag
cagatcgcctacaacgaggccaacgggatcgacccgcaaccactgcgcaagaagatcgcc
gacatcctcgaccaggtctatcgcgaggcctctgacacagaagccagcgtggtggagatc
ggcgggtcagggcgcaatgcgtcccgcggtcggcgcgcacagggcgagccgggccgcgcg
gtcagcgccggggtgttcgagggccgcgacacgaccagcatgccccgcgccgaactggcc
gacctgatcaaggacctcaccgcacagatgatggccgccgcccgggacttgcaattcgag
ctggccgcgcggttccgggacgagatcgccgacctgaagaaggaactgcgcgggatggac
gccgccggcctgaaatga
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