Mycobacterium intracellulare subsp. intracellulare: MIP_04428
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Entry
MIP_04428 CDS
T02325
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mid
Mycobacterium intracellulare subsp. intracellulare
Pathway
mid03030
DNA replication
mid03410
Base excision repair
mid03420
Nucleotide excision repair
mid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MIP_04428
03410 Base excision repair
MIP_04428
03420 Nucleotide excision repair
MIP_04428
03440 Homologous recombination
MIP_04428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mid03032
]
MIP_04428
03400 DNA repair and recombination proteins [BR:
mid03400
]
MIP_04428
Enzymes [BR:
mid01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MIP_04428
DNA replication proteins [BR:
mid03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MIP_04428
DNA repair and recombination proteins [BR:
mid03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MIP_04428
NER (nucleotide excision repair)
GGR (global genome repair) factors
MIP_04428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
NYN_YacP
HHH_2
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AFS15014
UniProt:
J9WCR3
LinkDB
All DBs
Position
complement(3277376..3280102)
Genome browser
AA seq
908 aa
AA seq
DB search
MKAVPATKTATKASEEQTRPTLMLLDGNSLAFRAFYALPAENFKTRGGLTTNAVYGFTAM
LINLLRDEAPTHIAAAFDVSRQTFRSERYPEYKANRSATPDEFHGQIDITKEVLAALGIT
VLAEPGFEADDLIATLATQAENEGYRVLVVTGDRDSLQLVSENVTVLYPRKGVSELTRFT
PDAVVEKYGLTPTQYPDFAALRGDPSDNLPGIPGVGEKTASKWIGEYGSLQALVDNVDSV
RGKVGDALREHLASVIRNRELTDLVKDVPLAQTPDTLRLQPWDRDQIHRLFDDLEFRVLR
DRLFETLAAVEPEVDEGFDVRGGALEAGELAVWLAEHSSGKRFGLAVVGTHLAYDADATA
LAIVSADGEGRYIDTATLDPEDEAALASWLADPGPPKALHEAKLAMHDLAGRGWMLAGVT
SDTALAAYLVRPGQRSFSLDDLSLRYLRRELRAENPEQQQLSLLDDTDGTDDQAVQTLLL
RAVAVLDLADALDEELARINSTSLLSGMELPVQRVLAGMENAGIAVDLELLTELQSDFAH
LIRDAAEAAYAVIGKQINLGSPKQLQAVLFDELEMPKTKRTKTGYTTDADALQSLFDKTG
HPFLQHLLAHRDATRLKVTVDGLLNSVASDGRIHTTFNQTIAATGRLSSTEPNLQNIPIR
TEAGRRIRDAFVVGDGYSELMTADYSQIEMRIMAHLSKDEGLIEAFNTGEDLHSFVASRA
FGVPIEEVTAELRRRVKAMSYGLAYGLSAYGLSAQLKISTEEAKDQMEQYFARFGGVRDY
LMAVVEQARKDGYTSTVFGRRRYLPELDSSNRQVREAAERAALNAPIQGSAADIIKVAMI
ETDKAIKDAGLSSRILLQVHDELLFEVAAGEREQLEALARDKMGGAYPLDVPLEVSVGYG
RSWDAAAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagccgtgcccgccacgaaaaccgctacgaaggccagcgaggaacagaccaggccg
acgctcatgctgctggacggcaactccctggcgttccgggcgttctatgcgctgcccgcc
gagaacttcaagacccgcggcgggctgaccaccaacgcggtctacggcttcaccgccatg
ctgatcaacctcctgcgcgacgaagcccccacccacatcgccgcggccttcgacgtgtcg
cggcagaccttccgctccgagcgctatccggagtacaaggccaatcggtcggcgacgccc
gacgagttccacggccagatcgacatcaccaaggaagtcctggccgccctgggcatcacg
gtgctcgccgagccgggcttcgaggccgacgacctgatcgccaccctggccacccaggcc
gaaaacgagggctatcgcgtgctggtggtcaccggcgaccgcgattcgttgcagttggtc
agcgagaacgtgacggtgctctacccccgcaagggggtgagcgaattgacccgcttcacc
ccagacgctgtcgtcgagaagtacgggctgacgcccacgcagtaccccgacttcgccgcg
ctgcgcggcgaccccagcgacaacctgcccggcatccccggtgtgggggagaagaccgcc
tccaagtggatcggcgagtacgggtcgctgcaggcgctggtcgacaacgtcgattcggtc
cgcggcaaggtgggcgacgcgctacgcgaacatctggccagcgtgatccgcaaccgcgag
ctcaccgatctggtcaaagacgtgccgctggcccagactcccgacacgctgcggctgcaa
ccgtgggaccgcgaccagatccaccggctcttcgacgacctggagttccgggtgctgcgc
gaccggctgttcgaaaccctggccgcggtggagcccgaggtcgacgagggcttcgacgtg
cgcggcggcgcgctggaagccggcgagctggcggtgtggctggccgagcacagctccggg
aagcgcttcgggctggccgtcgtcggcacccacctggcctacgacgccgacgccaccgcg
ctggccatcgtctccgccgacggcgagggccgctacatcgacaccgcgacgctggatccc
gaagacgaggcggcgctggcatcctggctggcagacccagggccgcccaaggcgctgcac
gaagccaagctggccatgcacgacctggccgggcggggctggatgctggccggcgtcacc
tccgacaccgcgctggcggcctacctggtgcgccccgggcagcgcagcttctccctcgac
gacctgtcgctgcgctatctgcgtcgcgagttgcgggccgaaaaccctgagcagcaacag
ctttcgctgctcgacgacaccgacggcaccgacgatcaggcggtgcagacgctgcttttg
cgtgccgtggcggtgctggatctggccgacgcgctcgacgaggaactggcccgcatcaac
tccacctcgttgctcagcggcatggagctgccggtgcagcgggtgctggcggggatggaa
aacgccggcatcgccgtcgatttggagttgctgaccgagctgcagagcgacttcgcccac
ctgatccgcgacgcggccgaagcggcgtacgcggtgatcggcaagcagatcaacctgggc
tcgccgaaacagttgcaggcggtgctcttcgacgagctggagatgccgaagaccaagcgc
accaagaccggatacaccaccgacgcggacgcgctgcagtcgctgttcgacaagaccggt
cacccgttcctgcaacatctgctggcccaccgcgacgccaccaggctcaaggtcaccgtc
gacgggctgctgaattcggtggcctccgacgggcgcatccacaccacgttcaaccagacc
atcgcggcgacgggcaggttgtcgtcgaccgagccgaacctgcagaacattccgatccgc
accgaggccggccggcggatccgcgacgcgttcgtggtcggcgacggctacagcgagctg
atgaccgccgactacagccagatcgagatgcggatcatggcccacctgtccaaggacgag
gggctcatcgaggcgttcaacaccggggaggacctgcactcgttcgtcgcctcccgcgcc
ttcggcgtgccgatcgaggaggtcaccgccgaactgcgccgccgggtcaaggccatgtcc
tacgggctggcctacggattgagcgcctacgggctgtccgcccagctcaagatctccacc
gaagaggccaaagaccagatggagcagtacttcgcccggttcggcggagtccgcgactac
ctgatggccgtggtggaacaggcccgcaaggacggctacacgtcgacggtgttcggccgc
cgccgctatctgcccgaactcgacagcagtaaccgccaggtgcgcgaggccgccgagcgg
gcggcgctcaacgcgcccattcagggcagcgccgccgacatcatcaaggtggcgatgatc
gaaaccgacaaggcgatcaaggacgccgggctgtcctcgcggatcctgctgcaggtgcac
gacgagctgctgttcgaggtcgcggcgggggagcgcgagcagctcgaagcgttggcccgc
gacaagatgggcggcgcctacccgttggacgtcccgctcgaggtttcggtgggctacggc
cgcagctgggacgctgcggcgcactga
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