Mycobacterium intracellulare subsp. intracellulare: MIP_05130
Help
Entry
MIP_05130 CDS
T02325
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mid
Mycobacterium intracellulare subsp. intracellulare
Brite
KEGG Orthology (KO) [BR:
mid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mid03016
]
MIP_05130
Enzymes [BR:
mid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MIP_05130
Transfer RNA biogenesis [BR:
mid03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MIP_05130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AFS15459
UniProt:
J9WDZ9
LinkDB
All DBs
Position
3785508..3786800
Genome browser
AA seq
430 aa
AA seq
DB search
MGEPSPDGPGSSAPGGTEPAPTPLPRPTEGVPPISVSVYEIEAAAERLDRGRGPFAVDAE
RASGFRYSNRAYLIQIRRAGSGTVLIDPVSHGRDPLEALRPVAEVLGTDEWILHSADQDL
PCLAEVGMRPPALYDTELAGRLAGFERVNLATMVERLLGFGLAKGHGAADWSKRPLPAEW
LNYAALDVELLIELRAAIAEVLAGQGKTDWAAQEFDYLRDTGSKDPGAAARRDRWRRTSG
IHRVRDKRGLAAVRELWLTRDQIAQRRDIAPRRILPDSAIIDAALANPTTVEELVALPVF
GGRNQRRSAATWLAALEAARQNKNPPVDAEPPNGPPPPARWSRRKPEAAARLEAARAALS
EVSERVHVPTENLVSPDLVRRLCWDWEAAPDPFEAVEAFLRAGQARPWQRELVDPVLARA
LQAEGTESAG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaaccgtcgcccgacgggccgggcagcagcgcgcccggcggcaccgaacccgcc
cccaccccacttccacgcccgaccgaaggcgtcccgcccatctcggtgagcgtgtacgaa
atcgaggccgcggcagagcgcctggaccgtgggcgcgggccgttcgcggtggacgccgag
cgggcgtcgggtttccgctactccaaccgggcctacctgatccagatccgccgggcgggc
tccggcaccgtgctgatcgacccggtgagccacggccgcgacccgctggaggcgctgcgg
ccggtggccgaggtgctgggcaccgacgaatggatcctgcactcggccgatcaggacctg
ccctgtttggcggaggtgggcatgcggccgcccgcgctgtatgacaccgagctcgcgggc
cgcctggccgggttcgagcgcgtgaacctggccaccatggtcgagcggctgctgggtttc
gggctggccaagggccacggcgcggcggactggtccaagcgccccctgcccgccgaatgg
ctcaactacgccgcgctggacgtggaactgctcatcgagctgcgcgcggcgatcgcggag
gtcctcgccgggcagggcaaaaccgattgggccgcacaggaattcgactacctgcgggac
acgggttcgaaagatccgggtgccgcggcgcgacgggaccggtggcgacgaacgtcggga
atccatcgggtgcgcgacaagcgcggcctggccgcggtgcgcgaattgtggttgacgcgc
gaccagatcgcgcagcgccgcgacatcgcgccgcggcgcatccttccggactcggccatc
atcgacgccgcgctggccaacccgacgaccgtcgaggaactggtcgccctgcccgtgttc
ggggggcgcaatcaacgccgcagcgccgcgacgtggctggcggcgctggaggccgcgcgc
cagaacaagaatccgcccgtggacgccgaaccgccgaacgggccgccgccccccgcgcgg
tggagccggcgcaaaccggaggccgccgcgcggctcgaggccgcgcgggcggcgctgtcg
gaggtgtccgagcgggtgcacgtccccaccgagaacctggtctcgccggacctggtgcga
cggctgtgctgggactgggaggccgcgccggatccgttcgaggccgtcgaggcgtttctg
cgggccgggcaggcccggccctggcagcgggagttggtggatcccgtgctggcccgggcg
ctgcaggcggaaggcaccgaaagcgccggttag
DBGET
integrated database retrieval system
