KEGG   Mycobacterium intracellulare subsp. intracellulare: MIP_05530
Entry
MIP_05530         CDS       T02325                                 
Name
(GenBank) DNA-binding protein HU -like protein
  KO
K03530  DNA-binding protein HU-beta
Organism
mid  Mycobacterium intracellulare subsp. intracellulare
Brite
KEGG Orthology (KO) [BR:mid00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mid03032]
    MIP_05530
   03036 Chromosome and associated proteins [BR:mid03036]
    MIP_05530
   03400 DNA repair and recombination proteins [BR:mid03400]
    MIP_05530
DNA replication proteins [BR:mid03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    MIP_05530
Chromosome and associated proteins [BR:mid03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    MIP_05530
DNA repair and recombination proteins [BR:mid03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      MIP_05530
SSDB
Motif
Pfam: Bac_DNA_binding HC2 Extensin_1 HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: AFS15722
UniProt: J9WM83
LinkDB
Position
complement(4041091..4041753)
AA seq 220 aa
MSEGLMNKAELIDVLTQKLNTDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRR
AARVARNPRTGETVKVKPTSVPAFRPGAQFKAVVSGAQRLPSDGPAVKRGVVGGTGAAKK
TAAKKAPAKKAAAKKAPAKKAAAKKAPAKKAAVKKAPAKKAAVKKAPARKAATKAPAKKT
AAKKAPARKAATKAPAKKAASKSTARKAPAKKTTARRGRR
NT seq 663 nt   +upstreamnt  +downstreamnt
gtgtcggagggattgatgaataaggcagagctcattgatgtgctcacacagaaattgaac
acggaccgtcggcaggcgaccgcagcggtcgagaacgttgtcgacaccattgtgcgtgcg
gtacacaagggcgacagcgtcaccattaccgggttcggtgtgttcgaacagcggcgccgc
gcagcgcgcgtggctcgcaacccgcgtaccggtgagacggtgaaggtgaagccgacttcc
gtccccgcgttccgtcccggtgcccaattcaaagcggttgtgtctggcgcacagcgtctc
ccgtcggacggcccggccgtcaagcgcggtgtggtaggtggcacgggcgcggccaagaag
accgcggccaagaaggctcccgccaagaaggctgcggccaagaaggctcccgccaagaag
gcggcggccaagaaggctcccgccaagaaggccgcagtgaagaaggctccggccaagaag
gccgcagtgaagaaggctccggcccgcaaggccgcgaccaaggctccggccaagaagact
gcggcaaagaaggctccggcccgcaaggccgcgaccaaggccccggccaagaaggccgcg
agcaagtcgacggcccgcaaggctcccgccaagaagacgaccgcgcgtcgcggccgccgg
tag

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