Mycobacterium intracellulare subsp. intracellulare: MIP_05941
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Entry
MIP_05941 CDS
T02325
Name
(GenBank) DNA topoisomerase 1B
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mid
Mycobacterium intracellulare subsp. intracellulare
Brite
KEGG Orthology (KO) [BR:
mid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mid03032
]
MIP_05941
03400 DNA repair and recombination proteins [BR:
mid03400
]
MIP_05941
Enzymes [BR:
mid01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MIP_05941
DNA replication proteins [BR:
mid03032
]
Prokaryotic type
DNA Topoisomerases
MIP_05941
DNA repair and recombination proteins [BR:
mid03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MIP_05941
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AFS15999
UniProt:
J9WFH0
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All DBs
Position
4309350..4310408
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AA seq
352 aa
AA seq
DB search
MMRLRRSVLSKPGIARKRRGKGFSYYEPGGKPVSDPETLQRIKDLVIPPAWKKVWISPHP
NGHIQAVGVDAAGRRQYLYHSAWQAERAEEKFDRVLELSTRLPACRAEIAKDLARHGLTR
KRVLALALRLLDRGYFRAGGEQYAEEHESYGLSTLLCEHVVVRRDAVEFDFPAKSGVRRT
VEIEDPDVVRAVRALMRRPDRTERLLVCRNSSGWINVRADDLNARFKELAGDDYTVKDLR
TWHGTVLAAAAFADAGPAVSGRVAKRVEAAVMKEVAEELGNTPAVARGSYVDHRVVTGYE
QGLTIAAAARRAERAKSPDLAQEILDKATRMLIRRVAKADSANGSSGLRKTA
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgactgcgtcgcagcgtgctgagcaagccgggaatcgcgcgcaagcgtcgcgga
aagggcttctcctactacgagccgggcggcaagccggtttccgatccggaaaccctgcag
cgcatcaaggatctggtcatcccgccggcgtggaagaaggtgtggatctcgccgcatccg
aacggccacatccaggccgtcggcgtcgacgccgccgggcgccggcagtacctctaccac
tccgcgtggcaggccgaacgcgccgaggagaagttcgaccgggtgctggaactttcgacg
cggcttcccgcgtgccgcgccgagatcgccaaagaccttgcgcgccacggcttgacccgc
aagcgcgtgctggcgctcgcgctgcggctgctcgaccgcggttacttccgcgccggcggc
gagcaatacgccgaggaacacgagtcctacgggttgtccaccctgctatgtgagcatgtg
gtggtccggcgtgacgccgtcgaattcgactttccggccaagagcggggttcggcgcacc
gtggaaatcgaggaccccgacgtggtccgcgcggtgcgtgcgctgatgcgcaggcccgac
cgcaccgagcgattgctggtgtgccgcaactcttccgggtggatcaatgtgcgcgccgat
gacctcaacgcccgattcaaggagctggccggcgacgactacaccgtcaaggacctgcga
acgtggcacgggacggtgctggcggccgcggccttcgccgacgccggcccggcggtatcg
ggccgggtggccaagcgcgtcgaggccgccgtgatgaaagaggtcgccgaggagctgggc
aacacgcccgcggtggcgcgcggttcctacgtggatcaccgcgtcgtcaccggctatgag
cagggtctgaccatcgccgcggcggcgcgccgcgccgagcgcgccaaatcgcccgacctg
gcgcaggagattctggacaaggccacccgaatgctgatccggcgcgtggccaaggccgac
agcgccaacggatcgtccggcctgcgcaagacggcatga
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