Mycobacterium intracellulare subsp. intracellulare: MIP_06731
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Entry
MIP_06731 CDS
T02325
Name
(GenBank) Exo deoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mid
Mycobacterium intracellulare subsp. intracellulare
Pathway
mid03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mid00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MIP_06731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mid03400
]
MIP_06731
Enzymes [BR:
mid01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MIP_06731
DNA repair and recombination proteins [BR:
mid03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MIP_06731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AFS16530
UniProt:
J9WHQ3
LinkDB
All DBs
Position
4846243..4849545
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AA seq
1100 aa
AA seq
DB search
MPLHLHRAERTDLLADGLGALLADPPADPFAPELVVVPARGVERWLSQRLSHVLGRARGG
GVSGGVCAGVSFRSPGSLIAEIAGTADDDPWSPEAMAWPLLEAIDHSLDEPWCRPLATHV
GHFHTGAEAELRRGRRYEVARRLAGLFASYARQRPQLLIDWLGGDPGDLDEDLRWQPELW
RALVSRVAADPPHIRHAKTLARLSEAPSDLPARLSLFGHTRLSRTDSELLAALAIHHELH
LWLPHPSDRLWRALAGTRGAIPRREDTSHRAVGHPLLATLGRDLRELQRGLPADAQTDEY
LPGEARPDTLLGWVQSDIAANAVRPQGRALADDDRSVQIHNCHGPARQVDVLREVLLGLL
ADDPTLEPRDILVMCPDIETYAPLIVADFGLGDVVHGAHPAHQLRVRLADRSLVQTNSLL
AVASQLLGLAGGRVTATEVLNLAQAAPVRARFGFTDDDLEAITRWVRQANIRWGLDQEHR
RPYHVDFVHNTWRFGIDRILAGVAMSDDSNAWIDATLPLDDVSSNRVPLAGQFAEFVARL
HHVVDSLTGTRTLTEWLATLADAIASLARVHESEEWQTGQVQREFAAVLAQAGSRGDTVL
RLPDIRALLTRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGLFPRLGVVD
GDDALARHPMTGERDIRSEDRQLLLDAIGAATEKLVITYTGANEYSGQPRPPAVPLAELL
DALDVTTPTKVRHRIVIEHPLQPFDIRNVIPGELVPKVPFSFDPTVLRAARAASGEHTEQ
PKFVAAPLPPPPADDVNLADLVGFFKDPVKGFFRALEFTLPYDVDGVQDAMPVDINGLEE
WTVGDRMLGDILRGMSPDDARQAEWRRGTLPPGQLGWRKVTEIRDQAAALALEALRHRQD
HRSAAAYDVDVDLGAGRRLTGTVSPVYDDALVSVTYSRLDGKHLLESWIPLLALAAHDPG
RDWSAVCIGRMRRGRSIRVEGLGPPDGDPVEVLRELVTIYDAGRREPIPLPIKTSYAWAA
ARHGGDDPAAEARRRWKTSDRFPGEDQAPAHVRAWGRGAPLDDLMQPVRPGEECDGEDNR
LGAYAARLWLPMLRAERKLI
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttcatctgcaccgcgccgagcgcaccgatctgttggccgacgggctcggcgct
ctgctggccgatcccccggccgacccgttcgcccccgagctcgtcgtggtcccggcgcgc
ggggtggagcgctggctgagccagcggctgtcgcacgtgctcggtcgggcccgcggcggc
ggggtttccggcggggtgtgcgccggggtttcgttccgcagccccggctcgctgatcgcc
gagatcgccggcaccgccgacgacgatccgtggtcgccggaggccatggcgtggcccctc
ctggaggcgatcgaccactcgctggacgaaccgtggtgccgcccgctggcgacccatgtc
ggtcacttccacaccggcgcggaggctgagctgcgccgggggcggcggtatgaggtggcg
cgccggttggccgggctgttcgcctcctacgcacggcagcgcccgcaactgctgatcgac
tggctgggcggcgacccgggcgatctcgacgaggacctgcgttggcagccggagctgtgg
cgggcgctggtgtcgcgggtcgcggccgatcccccgcacattcgccacgccaagaccctc
gcgcggctgtccgaggcgcccagtgacctgcccgcgcggctgtcgctgttcgggcacacc
cggttgtcgcgcaccgactccgagctgctggccgccctggccatccaccacgagctgcac
ctgtggctgccgcaccccagcgaccggctgtggcgcgcgctggccggcacgcgcggggcg
atcccccgccgcgaggacaccagccaccgcgccgtgggccacccgctgctcgccaccctg
gggcgggacctgcgcgagctacagcgcggcctgccggcggacgcgcagaccgacgaatac
ctgcccggcgaggcgcgcccggacacgctgctcggctgggtgcagtccgacatcgccgcc
aacgccgtgcggccgcaggggcgcgcgctggccgacgacgaccggtcggtccagatccac
aactgccacggcccggcccgccaggtcgatgtgctgcgcgaggtgctgctcggcctgctg
gccgacgacccgacgctcgaaccgcgcgacatcctggtgatgtgcccggacatcgaaacc
tatgcgccgctgatcgtggccgacttcggactcggcgacgtggtgcacggcgcgcatccc
gcccaccagctacgggtgcgcctggcggatcgctcactggtccagaccaattcgctgttg
gctgtggcctcccaattgctggggctcgccggcggcagggtgacggccaccgaggtgctc
aacctggcacaggccgccccggtgcgcgcccggttcgggttcaccgacgacgatctggag
gccatcacccgctgggtgcggcaggccaacatccggtggggattggaccaggagcaccgg
cggccctaccacgtcgacttcgtgcacaacacctggcgtttcggcatcgaccggatattg
gccggcgtcgcgatgtccgacgattcgaacgcatggatcgacgcgacgctgccgctcgac
gacgtgagcagcaaccgggtcccgttggccggccagttcgccgaattcgtcgcccggctg
caccacgtggtcgactccctcaccggcacaaggacattgaccgagtggctggccaccctc
gccgacgccatcgcctcgttggcccgggtgcacgagtccgaggagtggcagaccggtcag
gtgcaacgggagttcgccgcggtcctggcgcaggccgggtcacggggcgacacggtgctg
cgactgcccgacatccgcgcactgctgacccggcacctcgccgggcgcccgacgcgggcc
aacttccgcaccggcacgctgacggtgtgcaccatggtcccgatgcgctcggtcccccac
cgggtggtgtgcctggtcggcctggacgacgggctgttcccgcgtctcggtgtcgtcgac
ggggacgacgcgctggcccgccacccgatgaccggggaacgcgacatccgttcggaggac
cggcaattgctgctcgacgcgatcggcgccgccaccgagaaactggtgatcacctacacc
ggcgccaacgaatattcggggcagccgcgcccacccgccgtgccgctggccgaattgctg
gacgccctcgatgtgacgacgccgacgaaggtgcgccaccgcatcgtgatcgagcatccg
ttgcagccgttcgacattcgcaacgtcatccccggcgaactggtaccgaaggtgccgttc
agtttcgaccccacggtgctgcgcgcggcgcgcgcggccagcggcgaacacaccgaacaa
cccaaattcgttgcggcgccgctgccgcccccgccggccgacgacgtcaacctcgccgac
ctcgtcggcttcttcaaagacccggtgaaaggcttcttccgcgccctggaattcacgctg
ccctacgacgtcgacggcgtccaagacgccatgccggtcgacatcaacggcctcgaggag
tggaccgtcggcgaccggatgctgggtgacatcctgcgcgggatgagccccgatgacgcg
cggcaagccgaatggcgccgcggcacactgccccccggtcagctgggctggcgcaaggtc
accgagatccgcgaccaggccgccgcgctggcgctcgaggcgctgcggcatcggcaagac
caccgatcggccgccgcctatgacgtcgacgtcgacctgggcgccggtcgccggctcacc
ggcacggtgtcgccggtctatgacgacgcgctggtctcggtgacctattcgaggctggac
ggcaagcacctgctcgaatcgtggattccgttgctggcgttggccgctcacgaccccggc
cgcgactggtcggcggtgtgcatcggccggatgcgccgcggcagaagcatccgggtcgag
gggctggggccaccggacggcgatcccgtcgaggtgctgcgcgagctggtgacgatctac
gacgcgggacggcgggaaccgattccgttgcccatcaagacgtcctacgcgtgggcggcg
gcccggcacggcggcgacgacccggcggccgaggcgcggcgccggtggaagaccagcgac
cgcttcccgggtgaggaccaggcgccggcgcacgtgcgggcgtgggggcgcggcgcgccg
ttggacgatctgatgcagccggtgcggccgggcgaggagtgcgacggcgaggacaaccgg
ctcggcgcgtatgcggcccggctgtggctgccgatgctgcgcgccgagcggaagctcatc
tga
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