Methanocaldococcus infernus: Metin_0142
Help
Entry
Metin_0142 CDS
T01234
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
mif
Methanocaldococcus infernus
Brite
KEGG Orthology (KO) [BR:
mif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mif03019
]
Metin_0142
Messenger RNA biogenesis [BR:
mif03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
Metin_0142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
DUF5814
Helicase_C
ResIII
SNF2-rel_dom
VMAP-M9
Motif
Other DBs
NCBI-ProteinID:
ADG12814
UniProt:
D5VQG1
LinkDB
All DBs
Position
complement(129514..131889)
Genome browser
AA seq
791 aa
AA seq
DB search
MIIVRKPKKKKDEIEIVRVNNVEEGEEVKNKEKIFASYKKVGEKYKLYRCRLGDKLIQPS
KVLNLLKSEKVYCLDDSKEILESLGIKVKEIDLCPFCLLKNVYKKLTNSNKVKYSSFYIC
LSCAINEVKEEINIKEEFIERFLRKFRDVDKVLKLLSIKRPSKESELTRYDIIVGEEKEI
KNLKIDELNIPDYLKEKIKERNIYELLPVQTLSVKAGLLEGKDLLVVSATSSGKTLIGEL
AGIKNLIEGKGKFLFLVPLVALANQKYNEFRERYKEFEVSLRVGIGRLSKKGDINTSLDA
DIIVGTYEGIDYLIRSNKLKDVGTVVIDEVHSLNLEERGARLDGLIGRLRYKFNAQMIYL
SATIGNPKELAKKLNSNLVLYKGRPVPLERHIIFCKNEFTKLNFIRDIVLSEWKNVSKFG
YRGQSLIFTYSRKRAEYIARHLKSKGIKAEFYHAGLEYSRRRRIEEEFAQQKLQCVVTTA
ALAAGVDFPASAVILESLAMGGDWLKPAEFQQICGRAGRKGMHELGKVYLLIEIGKKYHA
KMEESEDEVAFKLLNAQPENVNIVYNEDEEEEQILATLSAGIKEIDEVPYLGRNYSTEKI
LRKLESYGMVKGREITRYGRAVSISFLYPRVAERIKEGVLKDEDPLLLISEIMPLENIYL
SHSLRENLKKVLKINIPIKFFDALEVIKENMEKIRDKKLKNILIPILMEFEGAGFERVLE
KIINLRANKKSVGQICKIFYEDFRIQIYSGDLYYYLEHLLNLLDAIERIANIYNKKYAKK
IAEMKEKILSS
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgataattgtaagaaagccaaagaaaaagaaggatgagattgagatagttagagttaac
aatgtagaggaaggggaggaagttaaaaataaagagaagatctttgccagctataagaag
gttggagagaagtataagttatatagatgtaggttaggagacaagttaatacagccatct
aaagttttaaatctattaaaatctgaaaaggtttattgcttagatgattccaaggagatc
ttagaaagcttagggataaaggttaaggaaatagatctttgccctttttgccttttaaaa
aatgtctataaaaaattaacaaatagtaacaaagtaaaatactcctctttttacatctgt
ttgagttgtgctataaatgaggttaaggaagagatcaacataaaagaggaatttatagag
agatttttaaggaaatttagggatgttgacaaggttttaaagcttttgagtataaagaga
ccatctaaggagagtgagctaacaagatatgatattattgttggagaagaaaaggagata
aagaatttaaagattgatgagctaaacattccagactatttaaaggagaagataaaggag
agaaatatttatgaactccttcctgttcaaactctatctgtaaaggctggcctcttggag
ggaaaagatctattggttgtgtcagccacatcttcaggaaaaaccttgattggagagctt
gctggcattaaaaatttaattgaaggtaaagggaaatttttatttttagttcctttagta
gccttagccaatcagaagtataatgagtttagggagagatataaagaatttgaggtttct
ttaagggttggaattggaaggctgagtaagaaaggagatattaacacttccttagatgct
gatattatagttggaacctatgagggaattgattacttaattagaagtaacaagttgaag
gatgtaggaacagttgtgatagatgaagttcattctctaaacttagaagagagaggagca
agattagatgggttaattggaaggttgagatataagtttaatgctcaaatgatctattta
tctgcaactataggaaatcctaaggagctggctaagaagttaaactctaacttagtcctc
tataagggaaggcctgttcccttggaaaggcatatcattttttgtaagaatgaatttact
aagctaaacttcattagggatattgtattaagtgagtggaaaaatgtctctaagtttggc
tatagaggacagagcttaatattcacatactcaaggaagagagctgagtatatagcaaga
catttaaaaagtaaagggataaaggcagagttctaccatgctggcttagagtatagtaga
aggagaagaatagaggaagagtttgctcagcagaagttacagtgtgtagtcactactgca
gccttagctgctggtgttgacttcccagcttcagctgttatcttggagagcttagccatg
ggaggagattggctaaagcctgcagaattccaacagatctgtggaagggctggaaggaaa
ggaatgcatgagcttggaaaggtttatttactaatagagattggaaaaaagtatcatgca
aagatggaagagagtgaagatgaagtagcttttaagctactaaatgctcagcctgagaat
gttaatatagtatataatgaagatgaagaggaggagcaaatacttgctacactatcagct
gggattaaggagatagatgaagttccttacttaggaagaaattactcaacagagaagata
ttaagaaagttggagagttatggaatggttaagggaagagagataacaagatatgggaga
gctgtttccatctctttcttatacccaagggtggctgagaggataaaggagggagtgtta
aaagatgaagatcctctattactgatctctgagattatgccacttgaaaatatttatcta
tctcatagtttaagagagaatttaaaaaaggttttaaaaataaacattccaataaagttt
tttgatgccttggaggtgattaaggagaatatggaaaaaattagagataagaagttaaaa
aatatcttaatccctatccttatggagtttgaaggagctggctttgagagagttttagag
aagattattaacttaagagccaataaaaaaagtgttgggcaaatttgtaagatcttctat
gaagactttagaattcaaatatactctggagatctctactactacttagagcatctctta
aatctcttagatgctattgagaggatagcaaacatttacaataagaagtatgctaagaag
atagctgagatgaaggagaagatactaagctcttaa
DBGET
integrated database retrieval system
