Methanocaldococcus infernus: Metin_0249
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Entry
Metin_0249 CDS
T01234
Name
(GenBank) ABC transporter related protein
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
mif
Methanocaldococcus infernus
Brite
KEGG Orthology (KO) [BR:
mif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mif03009
]
Metin_0249
Ribosome biogenesis [BR:
mif03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
Metin_0249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
AAA_21
SMC_N
AAA_23
Fer4
AAA_16
nSTAND3
KAP_NTPase
Fer4_7
Fer4_10
Fer4_6
Fer4_21
AAA_15
AAA_24
AAA_22
RNA_helicase
Rad17
Fer4_16
DO-GTPase2
AAA
ABC_ATPase
Fer4_9
NACHT
TsaE
AAA_5
SRP54
Fer4_2
Motif
Other DBs
NCBI-ProteinID:
ADG12919
UniProt:
D5VQR6
LinkDB
All DBs
Position
complement(229870..231627)
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AA seq
585 aa
AA seq
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MRLAIIDYERCQPKKCSLECLKYCPGVRMGEKTIEINEDTGKPVISEVLCSGCGICVKRC
PFKAISIIGLPEELDESKIVHSYGQNRFKLFGLVVPRDGVVGIIGQNAIGKSTILRILAG
ELIPNLGKHDEEPSYDKVIEKFKGTELQSYFEMLKERKVKAIHKVQYVDILPKVVKGKVR
DILKRVDERGKFEEVVKKLELENILDRELDKLSGGELQRVAIAAAYLREGDIYFFDEPTS
WLDIRQRFNMAKLVRELKKVVVVEHDLIVLDYLSDYVHIMYGVPGAYGIVSLPKSVRVGI
NEYLYGELKDENIRFRKEPIVFEKRAIIDYKNRPILLSYSDMKKSLGSFKLEVKGGTIYK
GEVIGILGPNGIGKTTFIKLLAKVIEPDEGEVFSEDIKVSYKPQYITPDYDGTVEDLLSS
ITNIHSSYYKSEIINPLQLEKLLDREVKELSGGELQRVAIAACLSRDADIYLLDEPSAFL
DVEQRLAVSKVIRRIADEKEAGIFVVDHDILFQDYISDRFIVFSGEPGIYGKGSEPLNKR
EGANRFLKEMQITFRRDPETGRPRANKEGSQKDREQKEKGEYYYE
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgagattggcaataattgactatgagagatgtcagccaaaaaaatgctccttagagtgc
ttaaaatactgtcctggagttagaatgggagagaaaacaatagagattaatgaagacact
ggaaagcctgttatttcagaggttttatgctctggctgtgggatctgtgttaagagatgt
ccatttaaagctatatcaattataggcttacctgaagagcttgatgagagtaagatagtc
cattcctatggacagaataggtttaagctctttggcttggttgtgccaagggatggggtt
gttggaatcattgggcaaaatgctattgggaagagtacaatattaaggatcttagcaggg
gaattaatccctaacttaggaaaacatgatgaagagccaagttatgataaggtgatagaa
aaatttaaaggaacagagttacaaagttattttgaaatgctaaaagagaggaaagtaaaa
gctattcataaggttcagtatgttgacatcttgccaaaggttgttaagggaaaggttaga
gatattttaaagagggtagatgagagaggaaagtttgaggaagttgttaaaaagcttgag
cttgaaaatatcttagatagggagcttgacaaactctctggtggagagttgcagagagtt
gctatagctgcagcttatttaagagagggagacatttacttctttgatgagccaacctct
tggttagatataaggcaaaggtttaacatggctaagcttgttagggagttaaaaaaggtt
gttgttgttgagcatgacttaatagtccttgactacctctctgattatgttcatatcatg
tatggggttcctggagcttatggaattgtttcactaccaaagagtgttagagtgggaata
aatgaatatctctatggagagttaaaggatgagaatataagatttagaaaagagcctatt
gtttttgaaaagagagctattatagattacaaaaataggcctattttattaagctattct
gatatgaaaaagtctcttggatcttttaaattggaagttaaaggaggaacaatctacaag
ggagaagttatagggatcttaggccctaatgggataggaaaaactacctttatcaagctc
ttagctaaggttatagagccagatgagggagaagtatttagtgaagatatcaaagtttct
tacaagccacagtatataactccagactatgatgggactgttgaagaccttctaagctca
ataactaatatacactcctcctattataagtcagagattatcaaccctttacagcttgag
aaactattggatagggaagttaaagagctttcaggtggagagttgcagagagtagctata
gctgcatgtttaagtagagatgctgacatctatttattggatgagccatcagccttctta
gatgttgagcaaaggttagctgtctctaaggttattagaagaatagctgatgaaaaagag
gctggaatctttgtagttgatcatgacatcctcttccaagactatatctcagatagattc
atagtattctcaggagagccaggaatttatgggaagggaagtgagccattgaataagagg
gaaggagctaatagatttttaaaagagatgcaaatcacctttaggagagatcctgaaaca
ggaaggccaagggctaataaagagggaagtcaaaaggatagagagcagaaggagaaggga
gaatattactatgaataa
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