KEGG   Methanocaldococcus infernus: Metin_0300
Entry
Metin_0300        CDS       T01234                                 
Name
(GenBank) flap structure-specific endonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
mif  Methanocaldococcus infernus
Pathway
mif03030  DNA replication
mif03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mif00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Metin_0300
   03410 Base excision repair
    Metin_0300
   03450 Non-homologous end-joining
    Metin_0300
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mif03032]
    Metin_0300
   03400 DNA repair and recombination proteins [BR:mif03400]
    Metin_0300
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mif04147]
    Metin_0300
DNA replication proteins [BR:mif03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Metin_0300
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Metin_0300
DNA repair and recombination proteins [BR:mif03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Metin_0300
Exosome [BR:mif04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Metin_0300
SSDB
Motif
Pfam: XPG_I XPG_N eIF3_N DUF1002 FtsZ_C
Other DBs
NCBI-ProteinID: ADG12970
UniProt: D5VQW7
LinkDB
Position
complement(276012..276983)
AA seq 323 aa
MGVQLGDYIPKKRIDFNDLKGKKLAIDGFNAIYQFLSSIRLKDGSPLTNKRGGITSAYNG
IFYKTIMLLENDIIPIWVFDGEPPKLKEKTREKRREEKKKAEEKLREVQDEIERARYFKR
LSYVNKDMIENCKYLLSLMGIPYVQAPSEGEAQASYMAKKGDVWAVVSQDYDSLLYGAPR
VVRNLTTTKDELELIELNEVLENLRISLDDLIDIAIMMGTDYNPKGIEGIGFKRAYEMVR
ARVAKDILKKEVKNYEEIKNIFKNPRVTDDYSLNLRLPDKEGLIKFLVEEHDFNYERVKK
HVDKLYNLIVSKTKQRTLDSWFK
NT seq 972 nt   +upstreamnt  +downstreamnt
atgggagttcaattaggtgactacattcctaagaaaagaatagattttaatgatcttaaa
gggaaaaagttggctatagatggatttaatgctatttatcaattcttatcctcaattaga
ttaaaagatggctctcctttaacaaataagagaggaggaataacttcagcatacaatgga
atattttacaaaaccatcatgttattggaaaatgatattatcccaatttgggtttttgat
ggagagcctcctaagttaaaagagaagacaagggagaagaggagagaggagaagaagaaa
gctgaagagaagttaagagaggttcaggatgagattgaaagagcaagatactttaaaagg
ttaagctatgtaaataaggatatgattgagaattgtaaatacttactaagcttaatgggc
ataccctatgttcaagctccttcagagggggaagctcaggccagctatatggctaagaaa
ggagatgtttgggcagtggttagtcaagattatgactctctattatatggagctccaagg
gttgttaggaatttaacaacaactaaggatgagttggagttaattgagcttaatgaagtg
ttagaaaatttaaggataagcttagatgatctaatagacatagctattatgatgggaact
gactataatcctaaggggatagaagggataggatttaaaagagcttatgagatggttaga
gcaagggtagctaaagacattttaaagaaagaggttaaaaactatgaagaaataaaaaat
atctttaaaaatccaagagttactgatgactatagcttaaatttaaggttgccagataaa
gaagggttaataaaatttttggttgaagagcatgactttaactatgagagggttaagaaa
catgtggataaactttataatctaatagttagtaaaactaagcagaggacattagatagt
tggtttaaataa

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