Methanocaldococcus infernus: Metin_0504
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Entry
Metin_0504 CDS
T01234
Name
(GenBank) Ribosome maturation protein SBDS-like protein
KO
K14574
ribosome maturation protein SDO1
Organism
mif
Methanocaldococcus infernus
Pathway
mif03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mif00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Metin_0504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mif03009
]
Metin_0504
Ribosome biogenesis [BR:
mif03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
Metin_0504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
ADG13174
UniProt:
D5VRH1
LinkDB
All DBs
Position
complement(455578..456285)
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AA seq
235 aa
AA seq
DB search
MVSLEEAVIARYTSHGEKFEILVDPYLAAKLKEGQEVDFDELLATDVVFKDANKGEKAPE
ELLIKVFGTTDIKEIAKKIIIKGHVQLTAKQREEIKEQKKRQIITIICRNTINPQTDTPH
PPHRIEKALEELKINIDIYRSAEEQVPEIVKKLKRLLPIRFEKRDIAVKIPPEYASKAYS
FLYKFGAVKQEEWASDGSLIVLIEIPSGIESEFYSELSKITKNNFQAKVLKKYSE
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccttagaggaggctgtaattgcaagatatacatcacatggagagaagtttgaa
attttggttgacccttacttagctgcaaagcttaaggaagggcaagaagtagattttgat
gaactcttagctacagatgtggtttttaaagatgccaacaaaggagagaaggctcctgaa
gagctattaataaaggtttttggtactacagacattaaagagattgcaaagaagataatt
attaaagggcatgttcaactaacagctaagcagagagaggagattaaagagcagaagaag
aggcaaataataactatcatctgtagaaacaccattaaccctcagacagacactcctcac
ccaccacataggatagagaaggctcttgaagagctaaaaataaatatagatatttataga
agtgctgaagagcaagttcctgagattgttaaaaagctgaaaagattacttcctataaga
tttgagaagagagacatagctgttaaaattcctcctgaatatgcttcaaaagcttacagc
ttcttatacaaatttggagctgttaagcaagaagaatgggcttctgatggctcattaata
gttcttattgaaattccaagtgggatagaatctgaattctactctgagttaagtaagata
acaaagaataatttccaagctaaggttttaaagaaatacagtgaatga
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