Methanocaldococcus infernus: Metin_0669
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Entry
Metin_0669 CDS
T01234
Name
(GenBank) rRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mif
Methanocaldococcus infernus
Brite
KEGG Orthology (KO) [BR:
mif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mif03016
]
Metin_0669
Enzymes [BR:
mif01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Metin_0669
Transfer RNA biogenesis [BR:
mif03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Metin_0669
Prokaryotic type
Metin_0669
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
UPF0113
Pus10_C
DUF5736
Phage_int_SAM_6
Motif
Other DBs
NCBI-ProteinID:
ADG13336
UniProt:
D5VRY3
LinkDB
All DBs
Position
complement(600663..601625)
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AA seq
320 aa
AA seq
DB search
MLVVREEAETDEKYGSYPEKRKIEDLIKYGIVVIDKPRGPTSHEVSSWVRKILNINKSGH
GGTLDPKVTGVLPVALERAVRTIDLWHIPPKEYVCLMHLHRDIDEDKVREIFKEFTGKIY
QRPPLKSAVKKRVRIRKIHELELLEKDGKDVLFRVKCQSGTYIRKLCEDIGEALGVSAHM
QELRRTKSGNFEEKDCVYLQDLLDAYIFWKEDKDEEELRKIIKPMEKGLEHLKKIVVKDS
AVDAICHGANVYVKGISKLSKDINRGDLVVVETLKGEAIGIGKALMSTKEILEKDKGEAV
DMERVFMERGTYPRMWKKRG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgttagttgttagagaagaagctgaaactgatgaaaaatatggttcttacccagagaag
aggaagatagaggatttaataaagtatggaattgtagttattgacaaaccaagaggacca
acatctcatgaggtgtcaagctgggttaggaaaattttaaacattaataagagtggccat
ggtggaacccttgatcctaaggttactggtgtccttcctgtagcccttgagagagctgtt
agaactatagacctttggcacatcccacctaaggaatatgtttgtttaatgcatttacat
agagatatagatgaagacaaagttagggaaatttttaaagaatttactggaaagatttat
cagaggcctcctttaaagtctgcagttaagaagagggttaggattagaaagatacatgag
cttgaactcttagagaaagatggaaaagatgttctctttagggttaaatgtcagtcagga
acttacataaggaagctctgtgaggacattggagaggcattaggtgtttctgcccacatg
caagagcttaggagaacaaagagtgggaactttgaggaaaaagattgtgtctatttacaa
gatttattagatgcctatatcttttggaaagaggataaggatgaggaagagttaagaaag
ataataaagccaatggagaaggggttagagcatttaaaaaagattgttgttaaagactct
gctgttgatgccatctgtcatggggctaatgtttatgttaaggggatatctaagctaagt
aaggacataaatagaggggacttagtagttgttgaaaccttgaagggagaggctattgga
ataggaaaggctttaatgagcacaaaggaaattttagagaaggataagggggaagctgtt
gatatggaaagggttttcatggagagagggacatatccaagaatgtggaaaaagagaggt
taa
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