Methanocaldococcus infernus: Metin_0842
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Entry
Metin_0842 CDS
T01234
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
mif
Methanocaldococcus infernus
Brite
KEGG Orthology (KO) [BR:
mif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mif03016
]
Metin_0842
Enzymes [BR:
mif01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Metin_0842
Transfer RNA biogenesis [BR:
mif03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Metin_0842
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TPR_HPS5_insect
Motif
Other DBs
NCBI-ProteinID:
ADG13506
UniProt:
D5VSF3
LinkDB
All DBs
Position
758519..759754
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AA seq
411 aa
AA seq
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MKVYVEGYGCVLNKADTEIIKESLIKEGFEITESLDEANIVIINTCVVRLETENKMMHRI
NYLNSLGKLVIVAGCLPKALKEKVEGFYHIYPKEAHRAGEILKDILTKKKKEDRGEEKEL
YKKLNYLKPKLVTPLPISEGCLGNCSYCIVKIARGKLISYPREFLVRKAEELVKGGAKCL
LITAQDTACYGLDRGDNLANLLKDLCQIEGEFIMRVGMMHAKYLSPILDEIIELYREEEK
IGKFLHLPLQSGDDEILKLMGRGYSVDEFISIVKEFKRKVKDLCFTTDVIVGFPGETEEA
FNNTLEVLRKLKPDYIHGAKYTQRKGTEAARMKQLDTKIRKRRTEILDKLRRELSYLNNK
KYVGREMRTLIIEKNKGYTENFKVVRFEKEQEVGKFKKVKIKDATTFTLRA
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttatgttgaaggatatggctgtgttctaaacaaggcagacactgaaattatt
aaagagtctttaattaaggaaggatttgaaataactgagagcttagatgaagctaatata
gtaattataaacacctgtgtagtaagacttgaaacagagaataagatgatgcatagaatt
aactatctaaactcccttggaaagcttgttatagttgctggctgtttgccaaaggcttta
aaggagaaggttgaaggattctatcatatctatcctaaagaggctcatagagctggagaa
attctaaaggatatattaaccaagaaaaagaaagaagataggggagaggaaaaagaactt
tataaaaagcttaactaccttaagcccaagcttgtaactccactacctatttcagaaggt
tgcttaggaaattgctcctactgtattgttaagatagcaagaggtaaactaatttcctat
ccaagagaatttttagttagaaaagctgaggagttagtaaaaggaggggctaagtgctta
cttatcactgcccaagatactgcttgctatgggttggatagaggagataacttagctaac
ttacttaaagatctatgtcaaattgaaggagagtttataatgagagttggcatgatgcat
gctaaatatctttctccaatattagatgagattatagagctttatagagaagaggaaaag
attgggaaatttttacatctccctctacagagtggagatgatgagattcttaagttaatg
ggaagaggttatagtgttgatgaatttattagcattgtaaaagaatttaaaagaaaggtt
aaagacctctgttttacaactgacgttattgttggctttccaggggaaacagaggaagct
tttaacaacactttggaagtgctaagaaagttaaagccagactatatacatggagctaaa
tacacccagaggaagggaacagaagcagcaagaatgaagcagttagatacaaagataaga
aagagaaggacagagatcttagacaagttgagaagagagcttagctatctaaataataaa
aaatatgttggtagggagatgagaactttaataatagagaaaaataaaggatacactgaa
aactttaaagttgtaaggtttgaaaaagagcaagaagttggaaaatttaaaaaagttaaa
attaaagatgctacaacattcacattaagggcttag
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