Methanocaldococcus infernus: Metin_1148
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Entry
Metin_1148 CDS
T01234
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mif
Methanocaldococcus infernus
Brite
KEGG Orthology (KO) [BR:
mif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mif03032
]
Metin_1148
03400 DNA repair and recombination proteins [BR:
mif03400
]
Metin_1148
Enzymes [BR:
mif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Metin_1148
DNA replication proteins [BR:
mif03032
]
Prokaryotic type
DNA Topoisomerases
Metin_1148
DNA repair and recombination proteins [BR:
mif03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Metin_1148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Intein_splicing
Toprim
Zn_ribbon_Top1
DNA_ligase_ZBD
DUF4364
Hint
Zn_ribbon_NUD
DUF5830
Motif
Other DBs
NCBI-ProteinID:
ADG13802
UniProt:
D5VT99
LinkDB
All DBs
Position
1030712..1033042
Genome browser
AA seq
776 aa
AA seq
DB search
MILIIAEKPSVAKKIANALGKAKKKKIYDVPYYEVDYNGKKIVVASAVGHLFTLVEKNKS
FSYPTFEIKWAPAYIEKGKSYVKNYIRALKELSKYADEIYIATDYDIEGELIGYHALKFC
CGRDKGKRMKFSSLTKREIIKAFENPISMDYGLVDAGESRHIVDWYFGINLSRALMHAVK
ALNDWKILSIGRVQGPTLYFLAEREKEIKEFKPKPYWILEAYLKNLKAIHEKEKFWDEEE
AKKIYEKVKDAKYGEVVKVERRVSKIKPPVPFDLGTLQREAYNYFKFSPKKTQEIAQSLY
EKGLCLHPDTLILLPDGVKKIKELKEEGEVLCLNHNLKLTKSRYKLLKRTVREKLIKITL
NDGTELITTREHPILVYRDKLLFVPSERLKEKEQIITLGHQNKELSLDNYLINEDLKRIS
EGDVYISKIKKIEEIEYEGEVYDLVVDKFHNFIANGIVVHNCSYPRTSSQKLPKDWSYLE
NILKTLKNSEYWKFAERIIEEKRKPIEGKKDDPAHPAIHVVDYPKNKEELSKEELKVYDL
IARRTLSAFWDEVEREHINAKISINDELFKASGSKTVKEGWHVIYHFPTFEELNLNLKEG
EKVKVEKIKLVKKETKPPKRYTLSSIIKELEKRNLGTKATRAEIVDKLIKRGYIKVSKNG
SLEVTDLGASIVEVFKRFCPEIVDEKLTRELEDKLENIQMKKINKDLVLEEAKKRLIEVL
KKFKEKEVEIGKNLTNKEVVGTCPRCGSPLVVKEGKYGKFIGCTNFPKCKFTKSLE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgattttaattattgctgaaaaaccaagtgtagctaaaaaaatagctaatgctcttgga
aaggctaagaaaaagaaaatttatgatgtcccatattatgaagttgactataatggaaag
aagatagtggtggcaagtgctgtaggccatctcttcacattggttgagaaaaacaagagc
tttagctatccaacatttgaaataaaatgggctcctgcttacatagagaagggaaagagc
tatgttaaaaactatattagagctttaaaagagctttcaaagtatgctgatgaaatttat
atagctacagattatgatatagaaggagagcttattggctaccatgccttaaagttttgc
tgtggcagagataaaggaaaaagaatgaaattttcttctttaactaagagagaaattata
aaagcttttgaaaatccaataagtatggactatggcttagtagatgctggagagagtagg
catatagtagattggtattttggaattaatttatcaagagctttaatgcatgcagtaaag
gctttaaatgattggaaaattctaagcattggtagggttcagggcccaacactctatttt
ttagctgagagagaaaaagaaattaaagaatttaagcctaagccatactggattttagaa
gcttatcttaaaaatctaaaagctattcatgagaaagagaaattttgggatgaggaagag
gctaagaaaatttatgagaaagtgaaagatgctaaatatggagaagtggttaaggttgag
agaagagtaagtaagataaagcctcctgttccctttgaccttggaactttacagagagag
gcttacaactattttaaattctctcctaagaagactcaggaaattgctcagtctttgtat
gaaaaagggttatgtcttcatccagacactttaatattgttaccagatggagttaaaaaa
attaaagagttgaaagaagagggagaagtattatgtttgaatcataacttaaagctaaca
aaatcaagatataagcttttaaaaagaactgtgagggaaaagttaataaaaattactttg
aatgatgggactgaactcatcacaacaagagagcatcctattttagtgtatagagataag
ctattatttgttccatcagagagattaaaggagaaggaacagataataactttaggacat
caaaataaagagctaagtttagacaactatttaattaatgaagatttaaaaagaatctca
gaaggagatgtctatatttcaaaaattaaaaaaattgaagaaattgaatatgaaggagaa
gtctatgatttggtagttgataagttccacaactttatagcaaatggaatagttgttcat
aactgttcctatccaagaacatcatcccaaaaactaccaaaggattggagctacttggag
aatatactaaaaactctaaaaaactcagaatattggaagtttgctgagagaattatagaa
gagaagaggaaaccaatagaaggaaaaaaggatgatccagcacatccagctatacatgtt
gtagattatccaaagaataaagaagagctgagtaaggaagagcttaaagtctatgatcta
atagcaagaagaaccttatcagctttctgggatgaggtggaaagagagcatataaatgct
aagatatcaataaatgatgagctctttaaagcctctggttctaaaacagtaaaggaaggt
tggcatgtcatttaccactttccaacatttgaagagcttaacttaaatttaaaagaggga
gaaaaggttaaggtagagaagataaagttagttaaaaaagagactaagccacctaagaga
tatacattatcaagtatcattaaagagcttgaaaagaggaacttagggactaaagctaca
agggctgaaattgtagataagttaattaagagaggttatataaaagttagtaagaatggc
tctttagaggttactgacttaggagcttcaatagttgaagtctttaaaagattctgtcct
gaaattgttgatgagaaattaacaagagagttagaggataagttagaaaatatacagatg
aagaagataaataaagaccttgtcttagaggaagctaaaaaaaggttaatagaagtgtta
aaaaaatttaaggagaaagaggttgaaatagggaagaacttaaccaataaagaagttgta
ggaacttgcccaagatgtggctctcctttagtggttaaagaagggaaatatgggaaattt
ataggttgtacaaactttccaaagtgtaaatttaccaaatccttagagtga
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