Methanocaldococcus infernus: Metin_1208
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Entry
Metin_1208 CDS
T01234
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
mif
Methanocaldococcus infernus
Brite
KEGG Orthology (KO) [BR:
mif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mif03016
]
Metin_1208
Enzymes [BR:
mif01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Metin_1208
Transfer RNA biogenesis [BR:
mif03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Metin_1208
Prokaryotic type
Metin_1208
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
ADG13861
UniProt:
D5VTF8
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All DBs
Position
1088531..1089460
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AA seq
309 aa
AA seq
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MLEITFLGTGAAIPSKRRNHMGIALKFNGDIYLLDCGENIQRQFLYTNLSPMKIKAIFIT
HLHGDHILGIPGIIQSLSFMGRTQKLEIYGPKGIKEIVEMAKNFGYNCIEYEVEVKEIKK
NKEVKILEEKDFCFYAYPTKHYIPSYAYIFKEIKKPRLDINKAKELGIKVGPDLKKLKEG
IPVKNIHGETIFPEQVLLPPKRGICVAYSGDTLPIEDFALFLKNLDCSLLIHEATFDSSE
KSLAEETYHSTVEDAYRIFKLSQAEKLILTHISARYDKEENFLIYKRDVERFNDNIEISE
DLKKYEVRV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
ttgttagaaataaccttcttaggcactggggcagcaattccatctaagagaaggaaccac
atgggaatagcattaaaatttaatggagacatctacttacttgactgtggtgaaaatata
cagagacagtttttatatacaaacctctcacctatgaagataaaggctatttttatcact
cacttacatggagatcacatccttggcattcctgggattattcagagtctctcttttatg
ggaagaactcagaagttagagatttatggacctaaggggattaaggagattgttgagatg
gctaaaaattttggatacaactgtatagagtatgaggtagaggttaaggaaattaaaaaa
aataaagaggttaaaattttagaggaaaaagatttttgtttctatgcttatcccactaag
cattacattccttcctatgcatacatatttaaggagataaagaagccaaggcttgacata
aataaggctaaagagcttggcataaaagtggggcctgacttaaaaaagttaaaggaaggg
atcccagttaaaaacattcatggagaaactattttccctgagcaagttcttctgccccca
aaaagaggaatttgtgtagcctacagtggagacaccttaccaatagaagactttgcccta
tttttaaaaaatttagattgctctcttcttattcatgaagccacctttgacagctctgag
aagagcttagcagaagagacttatcattcaactgttgaagatgcttatagaatattcaag
ctttcccaagctgagaagttgatattaacacacatctcagcaagatatgataaagaggag
aactttttaatttataagagagatgtagagagatttaatgacaatatagagatatcagag
gatttaaagaagtatgaggtgagagtttga
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