Methanotorris igneus: Metig_0331
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Entry
Metig_0331 CDS
T01510
Name
(GenBank) nucleic acid binding OB-fold tRNA/helicase-type
KO
K07466
replication factor A1
Organism
mig
Methanotorris igneus
Pathway
mig03030
DNA replication
mig03420
Nucleotide excision repair
mig03430
Mismatch repair
mig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Metig_0331
03420 Nucleotide excision repair
Metig_0331
03430 Mismatch repair
Metig_0331
03440 Homologous recombination
Metig_0331
03460 Fanconi anemia pathway
Metig_0331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mig03000
]
Metig_0331
03032 DNA replication proteins [BR:
mig03032
]
Metig_0331
03400 DNA repair and recombination proteins [BR:
mig03400
]
Metig_0331
Transcription factors [BR:
mig03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Metig_0331
DNA replication proteins [BR:
mig03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
Metig_0331
DNA repair and recombination proteins [BR:
mig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
Metig_0331
MMR (mismatch excision repair)
Metig_0331
DSBR (double strand breaks repair)
HR (homologous recombination)
Metig_0331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
DUF3127
Ssb-like_OB
Rep_fac-A_C
SHLD2_OB1
OB_MEIOB_N
DNA_pol_D_N
A2L_zn_ribbon
DUF7129
DZR_2
Zn_Ribbon_TF
FYVE
zf_C2H2_10
Motif
Other DBs
NCBI-ProteinID:
AEF95887
UniProt:
F6BAS3
LinkDB
All DBs
Position
complement(338471..340384)
Genome browser
AA seq
637 aa
AA seq
DB search
MDVNELKAKILSKISEEELNKLVREKIEEFGGLLNEEGAISLIAKEMGIEFDLEEEDYEF
TINDITEGQRNVEVTGRIMNISEIRTFKRKDGTEGKLRSIEIADNTGTIRLTLWDDKVEL
ADGLKVGDVVKVENAYSRKWRDRIELNSSADTKIDKLTDYDEEKYPQIKDIYKISELIPN
ITAKFEGEVVASYGIREFDRKDGSKGRLKSFILKDNTGSIRVTLWDDMADIEVNRGDYVR
VEGYVREGPYGLEASANSIEILKKGEKIVSKEVDIENLPNYENEIVTVRGRVMGISNKKT
VDLGDTTVEVQELYLEDETGRVRISFWRGKTNALNGINEGDLLKVTNCKVKLYTDREGYQ
RVDLIATAETEIVKDESISAPEYKENLCKIRDIVEGNVDKNDITVIGRVYRVFEVNEFER
EGGIGKVRNVIIEDETGRIRLVLWDENADLDIKEGDVVKVVYGYVRERGEYVDLNIGRFG
RIIVNPEGITIKSNRKFIADVEDGEDVEIRGTIVDYVKQGFVLYLCPNCRRKVVVVDDRY
SCPECGDVTPDEVLTLTLVVDDGTGTITCRLYNRNVEKLTKKSRDELINCDIDIIEELLG
EEFVFNGVIKKRDTLEMNVKNVREINLDEEINVIKSM
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaatgaactaaaagcaaaaatactatcaaaaatttcagaagaagaattaaat
aaattagtgcgtgaaaagatagaggaatttggcggattgttaaatgaggaaggagcaatt
tcattaattgcaaaagaaatgggaattgagtttgatttagaggaggaagattacgaattt
acaataaatgatataacagagggacaaaggaacgtagaggtaactggaaggataatgaac
atctccgaaatcagaacattcaaaagaaaagacggaactgaagggaagttgagatctatt
gaaatagcagacaacactggaactataaggttaacattgtgggatgataaggtagagtta
gcagatggtttaaaagttggagatgttgttaaggtagaaaatgcatactcaagaaaatgg
agagataggattgagttaaacagtagtgcagacacaaaaatagataagcttacagattac
gatgaagaaaaatacccacaaataaaagatatatacaaaatttcagaactaatcccaaat
ataacagcaaaatttgaaggagaagttgtagcatcctatggaattagagaatttgataga
aaagatgggagtaagggaagattaaaatcattcatattgaaggacaacacgggaagcata
agagttacattatgggatgacatggcagatattgaagtaaatagaggagactatgtaagg
gttgagggatatgttagggagggaccttatggtttagaggcaagtgcaaactccatagaa
atattgaaaaaaggagaaaaaatagtaagtaaagaagtggatatagaaaatcttccaaat
tatgaaaatgaaattgtaactgttagaggcagagtaatgggtataagtaacaaaaaaact
gttgatttgggagatacaactgtagaagtccaagagctttacttagaggatgaaactgga
agggttagaatatcattttggagaggtaaaaccaatgcattaaatggtataaatgagggg
gatttgttaaaggttacgaattgtaaagttaagttatatacagatagggaaggataccaa
agagttgatttaatagcgactgctgaaactgaaattgtgaaagatgaaagtatatctgcc
cctgaatataaagaaaacctctgcaaaataagagatatagttgaagggaatgttgataag
aatgacattacagtaattgggagggtttatagggtatttgaagtaaatgaatttgaaaga
gaaggtggcataggcaaggttagaaatgttattatcgaagatgagactggaaggattagg
ttggttttgtgggatgaaaatgcagatttggatataaaagaaggggatgttgtaaaggtt
gtctatgggtatgttagggaaagaggagaatatgttgacttgaacataggaagatttgga
agaataattgtgaatccagagggcataacaataaaatcaaatagaaaatttattgcagat
gttgaagatggggaagatgtcgagattagagggactatagtagattatgtaaagcagggt
tttgttttgtatctctgtccaaattgtaggaggaaagtggttgttgttgatgacagatac
tcatgcccggagtgtggagatgtaactccagatgaagttttaacattaactttggttgta
gatgatggaactggaacaataacatgcagattatacaataggaacgttgaaaaattaaca
aaaaagagcagagatgagttaattaattgcgatattgacataatagaagaacttttagga
gaagaatttgtgtttaatggagttattaaaaagagagataccttagagatgaatgtaaaa
aatgttagagaaataaacttggatgaagagataaatgttattaaaagcatgtag
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