Methanotorris igneus: Metig_0332
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Entry
Metig_0332 CDS
T01510
Name
(GenBank) DNA double-strand break repair rad50 ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mig
Methanotorris igneus
Brite
KEGG Orthology (KO) [BR:
mig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mig03400
]
Metig_0332
DNA repair and recombination proteins [BR:
mig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Metig_0332
Archaeal homologous recombinant proteins
Metig_0332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
Baculo_PEP_C
AAA_15
ATG17_like
NPV_P10
Rad50_zn_hook
AAA_29
GAS
AAA_27
SbcC_Walker_B
Seryl_tRNA_N
DUF1664
EzrA
AAA_21
Aip3p_Bud6_N
COG3_N
Laminin_II
Crescentin
AAA_22
AAA_13
Sec10_N
ABC_tran
Spectrin
DUF2203
Occludin_ELL
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
AEF95888
UniProt:
F6BAS4
LinkDB
All DBs
Position
complement(340950..343949)
Genome browser
AA seq
999 aa
AA seq
DB search
MIIKEIKMRNFKSHVNSEITFNKGITVIIGHNGSGKSSIFDAMHYALFKPRVGYEDLVTK
GKKDLSVELTFEVGGKTYKVVRERGNERLYANGKLIAKGSREVTKEIENILGIDEKVFTN
SIYIKQGEIAELINARPSERERIIAQLLGIGEYQKSWEMMRDVINAFREKLNSIEGELKN
KERIEKDIKEKTEELEKLKVKLRELKEELTNLNKELTKKRKELENWDKIREKFIKFTSKL
EKYESDLKGIENEIKKYEDDLQTISNAYSIIEKNEENYKQYLSIKEELENIRKSLNELKG
SVNKYNKLIGQKENIENRINKLETEISNFKYGEDLEYLNSILESLNEKIKQFEEIREAIK
DLERINEKLEEINNYKKIINENKELYEKYLKLEKEKDNLEKMVNEFATLKEKYNSIVKDL
KNLDKKKNELLDEISQHNIKEMEEKVKEMNDLEKKLNEIYEKKNKIQENIGEVRSKINAL
KKALNEIEKVEGRCPVCNSEISEEKKKELKEEYSKNLKEEEERLKDLSKKLEECNKEIEN
INKELKHRGRLKEKLSALKEKINQLNEVMDEIKKKKDEMKIIKEELSKFVIDGEDVEKRY
KKVKDELNNLSDAYTKYLTACEHLKGIDENKLIEEKNKLENIKGDYDLDTCNSNIENIRT
EINNINELIRLIEEKEKLKGELNDIENKILALLGHIEEYKEKEAKSKELEEKLGNLEAYY
EKYKNAFAILQNLSKSYNVDIKELKKHVENLLNEKLKEKSELLERIEVLNNRLKDLNYDE
GTHEKIREDYKKLEETIRNKEKELVECKTKIENITQHLEELNKYLDELKEKEKEKEKLSK
FIEYLGKVREVFSREGFQKYLREKYKPLIQKYTNEAFEEFDLPYTHIELTHDFDIKVHSP
NGVLSVNNLSGGEQIAVALALRLGIAKVLIGGRIECIILDEPTVYLDEERRKKLVEIFKN
IRTIPQMILITHHSELEQIADTLITVRKEGGISKVSING
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgataatcaaagaaattaaaatgagaaatttcaaaagccatgttaatagtgaaataaca
ttcaacaaaggaattactgtaattattgggcataatggaagtggaaaatcatctattttt
gacgctatgcattatgcattatttaaaccaagagttggatatgaagatttggttacaaaa
gggaaaaaagatttatctgttgaattgacatttgaagttggggggaagacatacaaggtt
gttagagaaagggggaatgaaaggttatatgctaacggcaaactcatagcaaagggttca
agagaagtgacaaaggagatagaaaatattttaggcattgacgagaaggtatttacaaac
tcaatttacattaagcaaggagagattgcggaacttatcaatgcacgcccatcagaaaga
gaaagaattatagcccaacttttaggcattggtgaatatcagaaatcttgggaaatgatg
agggacgttataaatgcatttagggagaagttgaattcaattgaaggagagttaaaaaat
aaggaaagaattgaaaaagatattaaagaaaaaactgaagagttagagaagttaaaggtt
aaactgagagaactaaaagaggaacttaccaatctcaacaaagaattaacaaaaaagagg
aaagagttagagaactgggataaaataagggagaagtttataaaattcacgtcaaaactt
gagaagtatgaatctgatttaaaaggtatagagaatgaaataaagaaatatgaggacgat
ttacaaacaatttcaaatgcttactcaataattgaaaaaaatgaagaaaattataagcaa
tatttatcaataaaagaagaattggaaaacataagaaaatctctaaacgaattaaaagga
agtgttaataaatacaacaaactcattgggcaaaaggagaacatcgaaaacagaataaac
aaattagaaactgaaatctccaattttaaatatggagaagatttagagtatttaaattca
atattggaatccttaaacgaaaaaattaaacaatttgaagaaattagagaagcaataaag
gatttagagagaataaatgaaaaattagaagaaataaacaactataaaaagataattaat
gagaataaagaactttatgagaaatatctaaaacttgagaaagaaaaggataacttagaa
aaaatggttaatgaatttgcaacattaaaggaaaaatacaacagtattgtaaaagatcta
aaaaacttggataaaaagaaaaatgaactattggatgaaattagccagcataacattaaa
gaaatggaagaaaaagttaaagaaatgaatgacttagagaaaaaactaaatgaaatatat
gaaaagaaaaacaaaatacaagagaacattggggaagttaggagtaaaataaacgcacta
aaaaaggcactaaatgagattgaaaaagttgagggaagatgtcctgtttgtaattcagag
attagcgaagagaagaaaaaagagttaaaagaagaatattcgaaaaatttaaaagaagag
gaagaaagattaaaagaccttagcaaaaaattagaagaatgcaacaaagagattgaaaat
ataaataaggaattgaaacatagaggaaggttaaaagaaaaactgagtgcattgaaggaa
aaaataaatcaacttaatgaggtaatggatgaaattaaaaagaaaaaggatgaaatgaaa
attattaaagaagaattatcaaaatttgttatcgatggggaggatgtagaaaagagatac
aaaaaggttaaagatgagttaaataacctaagcgatgcctacacaaaatacttaaccgct
tgcgagcatttaaagggtattgatgagaataaattgatagaggagaagaataaattagaa
aacataaaaggggattatgatttagacacttgtaactcaaacatagaaaacattaggaca
gaaattaataatataaatgaactaataaggttaattgaagaaaaggaaaaattaaaagga
gagttaaacgatattgaaaacaaaatcctggcactacttggacatattgaggaatataaa
gaaaaagaagcaaaatctaaggaattagaggagaaattagggaacctcgaagcatactat
gaaaaatacaaaaatgcctttgcaatattgcagaacttatcaaagtcatacaatgttgac
attaaagaattgaaaaagcatgtagaaaatttgttaaatgaaaaattaaaagaaaaatca
gaacttttggaaagaatagaggtgttaaataataggttgaaggacttaaattatgatgag
ggaactcacgaaaaaattagagaagattataaaaaattagaagaaactataagaaataaa
gaaaaagaacttgtagaatgtaaaacaaaaatagaaaacataacccaacatttagaagaa
ctaaataaatatttagatgagttaaaggaaaaagaaaaagaaaaagagaaactctcaaaa
ttcattgaatatttaggcaaggttagggaagtattttcaagagaagggttccaaaaatat
ttgagggagaagtataaaccactaatccaaaaatacacaaatgaagcatttgaggagttt
gatttaccatacacacatatagaactaacgcacgactttgatataaaagtccattcccca
aatggggttttaagtgttaataatttaagtggcggggagcagatagcagttgccctcgct
ttaaggcttggaatagcaaaggttctaattggaggccgaatagagtgcataatattagac
gaaccaaccgtttatcttgatgaagagaggagaaagaaactcgtggagatatttaaaaac
ataagaaccattccacaaatgatactcattacacaccactcagaattggaacaaatagca
gatacgctaataactgtaagaaaagaaggaggaatctcaaaggtatctattaatggttaa
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