Methanotorris igneus: Metig_0780
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Entry
Metig_0780 CDS
T01510
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mig
Methanotorris igneus
Brite
KEGG Orthology (KO) [BR:
mig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mig03032
]
Metig_0780
03400 DNA repair and recombination proteins [BR:
mig03400
]
Metig_0780
Enzymes [BR:
mig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Metig_0780
DNA replication proteins [BR:
mig03032
]
Prokaryotic type
DNA Topoisomerases
Metig_0780
DNA repair and recombination proteins [BR:
mig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Metig_0780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Intein_splicing
Toprim
LAGLIDADG_3
HTH_3
HTH_24
LAGLIDADG_2
Auto_anti-p27
KH_N4BP1_1st
PCI
HMBD
TrmB
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AEF96326
UniProt:
F6BCW5
LinkDB
All DBs
Position
797853..801746
Genome browser
AA seq
1297 aa
AA seq
DB search
MVALIICEKPSVAKKIAEALGKPKKKSIYGVPYYELERNGKKILVASAVGHLFTLVEKKE
GKFGEYPVFDIDWVPASIEEGKKYVENYIKALKKLSKEADEFYVATDWDIEGELIGYHAL
YYCCGKKNAKRMRFSSLTKKEIVKAFENPDTIDFGLVDAGDSRHKVDWYFGINVSRALME
AIRAVKRWKTMSTGRVQGPALAFLVERELEIKRFVPKPYWVISALLDEKLNATHEKEKFW
DEKEANQVYKKIKDVKEGIVVEVKKRKKKIKPNPPFDLGTLQREAYRIYKFSPKKTQEIA
QRLYEKSLCSYPRTSSQKLPKDKKYLEDVLSIIKNHPIYGKYAERILKENLKPIEGKKED
PAHPAIHIVDIPKEKLSEEEEKIYDLIARRTLAAFWDDAEREYCNITIDIGGEKFKLSGS
RTVKEGWHEIYYFTKFDEIELPPLKKNEKIKVEKINIERKETKPPKRYTVASIIKELESR
KLGTKCLTPNTLIKVEIDNIIKYIKIENLFELLNDRFKDGNVEFAINNKNIKCFSYDTDE
IKSIFKYISKRKLEKNESVYKIEFEDGSFIEVTEEHPILIYDGDGEFKYIRAKDLKKGMK
TISSIKYDDKEGDVICTWEKFIEICNEKSKLYGISEDIGKIREKLGMSKYKFAKKYGLSC
SSVWKYEKNKRIPIYLFKKLDLKKPNYIASTNKNVIIKNPFPLKISSSLVRILAHLIGDG
SIDKEKIKRENCYDFRYHNTNIDLIKQFVEDIERVFGIKLTIKKAKKRKNQKLKYYVQVP
SVVGRIISILFKEVIEKNAPKIPKEFYPEFIGALFDDEGCAIEKEGKAFISNTNLELLKD
VKEMLLELGIKSRIDEKQFKLFIKGRKNIQKFLNIIPFISVDKKQKLINALSNKYKWKDC
SVVKKEKEIIKVLGLYGAIDLNELSKKTKLPASVVREYIKEFIKNGIVEEIVSDNKKIVY
TLKIPPHKTFYRYIGEKVINKDFITKTISNIKKINYNGYVYDIINSEYSNFIANNIVVHN
STRAEIIDKLISRGYVVDDGSLRVTDLGIAVIETLKKFCPEIIDEKMTRDLEEKLELIQS
GKIKKEDVLKEAEEKLREILKKFKEKEKEIGKELVSKIDSTNKKLKTIGKCKCGGDLVII
RTKDKKRFVGCTNYPECNITYSLPKKGRIKVLNETCESCGLPVIGIDGQKLCINPECPSK
MPKENIEDLKESINNGKKICPKCGGKLVIKNGIYGAFLGCENYPKCKYTEKIKKNNGEVV
GKCPKCGGDLVKKNGKYGEFIGCSNYPKCRYTEKFKK
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atggttgcattgataatttgcgaaaagccatctgtcgcaaaaaagatagcagaggcgtta
ggaaaaccaaagaaaaaatccatatacggcgtgccttattatgaattagaaagaaatggg
aaaaaaattttagttgcaagtgcagttggacatctttttacattggttgagaaaaaagag
ggtaaatttggagaatatcctgtttttgatattgactgggttccagcatcaatagaggaa
gggaaaaaatacgtagagaattatataaaagcactaaaaaaattgtcaaaagaagcggat
gagttctatgtagctaccgattgggatattgaaggggagttgattggttaccatgcttta
tactattgttgtgggaagaagaatgcaaaaagaatgagattctcatcattaacaaaaaaa
gaaatagtaaaggcatttgaaaatccagataccattgattttgggttggttgatgcgggg
gacagtaggcataaggttgattggtattttgggattaatgtttcaagggctttgatggag
gcaattagggcagtgaagagatggaaaacaatgagcacaggaagagttcagggtcctgca
ttggcgtttttggttgaaagggaattggaaattaagaggtttgtcccaaaaccttactgg
gtaataagtgctttgttagatgaaaaactaaatgcaactcacgaaaaggaaaagttttgg
gatgaaaaagaggcaaatcaagtatataaaaaaataaaggatgtaaaagagggtattgtc
gttgaggtaaaaaagagaaagaagaagataaaaccaaatccaccatttgacttaggaact
ctgcagagggaggcttatagaatatacaaattctcccctaaaaaaacgcaggaaattgct
cagaggttgtatgaaaaaagcctttgctcttatccaagaacatcatcccaaaaattacca
aaagataagaaatatttagaggatgttttaagcataattaaaaatcatcctatatatgga
aagtatgcagagagaatattaaaagaaaacctaaagccaattgaagggaaaaaggaggat
ccagcacacccagcaatacatatcgttgatatcccaaaggaaaaattgtcagaggaagag
gagaagatatacgatttaattgcaaggaggacattggcagcgttttgggatgatgcagag
agagaatattgcaacataaccattgacattggaggagaaaaattcaaactcagcggttca
aggacagttaaagaaggttggcatgagatttattacttcacgaagtttgatgagattgaa
ctcccaccattaaagaaaaatgaaaaaataaaagtggaaaaaatcaacatagaaaggaaa
gaaacaaaaccaccaaagagatatactgttgcaagtattataaaggaacttgaaagcaga
aagttaggaactaaatgtttaacaccaaataccttaattaaagttgaaattgataatata
atcaaatatataaaaattgagaatttgtttgagttgttaaatgatagatttaaagatgga
aatgttgagtttgcaataaacaataagaatattaaatgtttctcttatgacactgatgaa
attaaaagcatatttaaatatataagtaaaagaaaattggaaaaaaatgaaagtgtttat
aaaattgagtttgaagatgggagttttattgaagttacagaagagcatccaattttaata
tatgacggtgatggggagtttaaatacatcagagccaaagatttaaaaaaagggatgaaa
actatatcatctataaagtatgatgataaagaaggggatgttatatgcacgtgggaaaaa
tttattgaaatatgtaatgaaaaatcaaaattatatggaatatcagaagatattggaaaa
attagagaaaaactaggaatgtctaagtataaatttgcgaaaaaatatggattaagctgt
tcaagtgtttggaaatatgaaaaaaacaaaagaattccaatatatttatttaaaaaattg
gatttaaaaaagcccaattatatagcatcaacaaataaaaatgttataataaaaaatcca
tttcctttaaaaatttcaagttcattggttagaatacttgcccatttaattggtgatggt
tcaatagacaaagaaaaaataaaaagagaaaattgctatgatttcagataccacaacaca
aatattgatttaataaagcaatttgttgaagatattgagagggtatttggtattaaatta
acaataaaaaaggcaaagaaaagaaaaaatcaaaagttaaaatactacgttcaagttcca
agtgttgttggaaggataatatcaatcctatttaaagaagttattgaaaaaaatgcccca
aaaataccaaaagaattctatcccgaatttattggagcattatttgatgatgaaggatgt
gctattgaaaaagaaggtaaagcatttatctcgaatactaatttagaattacttaaggat
gttaaggaaatgcttttagaacttggaattaaatcaagaattgatgaaaaacaatttaag
ttgtttattaaaggaagaaaaaacattcagaagtttttaaatattattccatttatatca
gttgataaaaagcaaaaattaattaatgctctttctaataaatataaatggaaagattgt
tcagtagtaaaaaaagaaaaagagattataaaagttttgggtttatatggtgctatagat
ttaaatgaattaagcaaaaaaacaaaattgccagcaagtgttgttagggaatatataaaa
gaatttattaaaaatgggattgttgaagaaattgtttctgacaataaaaaaattgtttat
acattaaaaattcctccacataagacattttataggtatattggtgaaaaagttattaac
aaagatttcatcacaaaaacaatctcaaatattaaaaaaatcaactataatggatatgtt
tatgatattattaactctgaatactcaaatttcatagcaaataatattgtagtccataac
tcaactagggcagaaattattgacaaattaattagtagaggttatgttgttgatgatggt
tccttaagagttacagatttaggaattgcagttatagaaacattgaaaaaattctgtcca
gagattatagatgaaaagatgacaagagatttggaagagaaacttgaattaatacaaagt
ggcaaaattaaaaaagaagatgttttaaaggaggcagaagaaaaattaagggaaatacta
aaaaaattcaaagaaaaagaaaaagaaattggtaaagaattggtcagcaaaatagatagc
acaaacaaaaagttaaaaactattgggaagtgtaaatgtgggggagatttggtaattata
agaacaaaggacaaaaaaagatttgttggatgcacaaattatcctgaatgcaatataacc
tactcactaccaaaaaaaggacgaataaaggttttaaatgaaacctgcgagagttgtgga
cttccagttataggcattgatgggcagaaactctgcataaatcccgaatgcccgtcaaag
atgccaaaagaaaacattgaggacttaaaagaaagcataaacaatggaaaaaaaatatgt
ccaaaatgtggtggaaaattagtaattaaaaatggcatctatggggcgttcttagggtgt
gagaactatccaaaatgtaaatataccgagaagattaaaaagaataatggtgaagttgtt
ggaaaatgtccaaaatgtggaggagatttagtaaagaaaaatggaaaatacggggagttc
ataggttgcagtaattatccaaaatgcagatatactgagaaatttaaaaaatga
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