Methanotorris igneus: Metig_1113
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Entry
Metig_1113 CDS
T01510
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mig
Methanotorris igneus
Brite
KEGG Orthology (KO) [BR:
mig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mig03016
]
Metig_1113
Enzymes [BR:
mig01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Metig_1113
Transfer RNA biogenesis [BR:
mig03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Metig_1113
Prokaryotic type
Metig_1113
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Tox-SHH
GIPC1_GH1
ARM_CUL7_CUL9
Motif
Other DBs
NCBI-ProteinID:
AEF96652
UniProt:
F6BDU1
LinkDB
All DBs
Position
complement(1113325..1114527)
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AA seq
400 aa
AA seq
DB search
MKIRQKPEDFIVEEIIDLGKTINENGEYYLYKLTKRNIENLKALSYIAKKFKIPLKEIGY
CGLKDRHALTTQYITIPKKYGILKLDEKNLKLEYVAPSNPLKIGDLIGNRFNITVRSIKS
EDFLKIADNIHALDYGVPNYFDSQRFGSVFERKFIAKEIMLGNYEEALKILLTKYKKSEK
KTIKDLKRYIAKNWGDWEKCAKYIEKNDIKSRMFVNIINALNKGKSYKEVFKYVDDRLRK
IFVSAYQSYLWNECIKEVLKDYVNEKDRYYLEYECGDFMFYKELDEDSFNALKDVKFPTI
APDVEYKGEVKEIIDIVLENEGITFKDLENIDCLDCKFVYSERKILCIPKDFKTSGFKPD
ELNNGKYKITLEFELNKGSYATMIIKRAFLGVKKSSRRKR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaggcaaaaaccagaggattttattgttgaagagattatcgacctgggcaaa
acaatcaacgagaatggagaatactacctatacaaactaacaaaaagaaacatagaaaac
ctaaaagcactctcctacattgctaaaaaattcaaaattccattaaaagagattggatat
tgcggtttaaaagatagacacgctttaactacccaatatataacaatcccaaaaaaatat
ggaattttaaagttagatgaaaaaaatttaaaattagagtatgttgctccttcaaatcca
ctaaaaattggggacttgattgggaatagatttaatattacagttaggagcataaaatca
gaagattttttgaagattgctgataatattcatgcgttggattatggtgtgccaaattac
tttgacagccaaaggtttgggagtgtctttgaaaggaaattcatagcaaaggaaatcatg
cttggaaactacgaggaagcattgaaaattttactcacaaaatacaaaaaaagtgagaaa
aagacaataaaggacttaaagagatacatagcaaaaaattggggagattgggaaaaatgt
gccaaatatattgaaaagaacgacatcaaaagccggatgtttgtaaatatcataaatgcc
ctaaacaaaggtaaaagttacaaagaagtgtttaaatacgttgacgacaggctgagaaaa
atctttgtttccgcatatcaaagttacctttggaatgaatgcattaaggaagttttaaag
gattatgttaatgaaaaagatagatattatttggagtatgagtgtggagatttcatgttc
tataaagaattggatgaagatagttttaatgcattaaaagacgtaaaattcccaacaatt
gcaccagatgttgaatataaaggggaggttaaggaaattattgacatagtattagaaaat
gagggaattacatttaaagatttagagaatattgactgtctggactgcaaatttgtatac
agtgagagaaaaatcttatgcattccaaaagatttcaaaacaagtggatttaaaccagat
gaattaaacaacggaaaatataagattactttggaatttgaattaaacaaaggtagttat
gcaactatgattataaagagggcattcttaggagtaaaaaagagtagcagaagaaaaaga
taa
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