Methanotorris igneus: Metig_1133
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Entry
Metig_1133 CDS
T01510
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
mig
Methanotorris igneus
Pathway
mig03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mig00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Metig_1133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mig03021
]
Metig_1133
Transcription machinery [BR:
mig03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Metig_1133
Prokaryotic type
Archaeal type
TFB
Metig_1133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Lar_restr_allev
UPF0253
Sigma70_r4
Cyclin_C
Vps36-NZF-N
HTH_AsnC-type
Zn_ribbon_PaaD
BRF2-like_C_cyclin_rpt
HTH_Tnp_ISL3
DUF7079
TMIE
Ribosomal_S27e
RPA_interact_C
DUF5830
Motif
Other DBs
NCBI-ProteinID:
AEF96672
UniProt:
F6BDW1
LinkDB
All DBs
Position
1131403..1132434
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AA seq
343 aa
AA seq
DB search
MTTKQELKEKITTTENEKSEKKIKTTNNEKIKSDKNVILEKEEELVCPICGSTNVIKDYE
RAEIVCENCGCVLQQNLFDVGPEWRAFDHEQRVKRSRVGAPMTYTIHDKGLSTVIDWRNK
DSYGKDISANKRAQLYRLRKWQRRIRVSDASERNLAFALSELDRIASKLGLPRNVRENAA
VLYRGAVEKGLIRGRSIEGVAAAALYAACRRCRVPRTLDEIAEASRVDRKEIGRTYRFLA
RELGIKLAPTNPIDYVPRFASELGLPGEVESKAIAILQKAAEKGLTSGRGPTGVAAAAIY
IASVLLGNRRTQRDVAEVAGVTEVTIRNRYKELTEHLDIDVTL
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccaaacaagaactcaaagaaaaaataacaaccactgaaaacgaaaaatcagaa
aaaaagattaaaactactaacaacgaaaaaattaaaagcgataaaaatgttatccttgaa
aaagaagaagaattagtatgtccaatttgtggaagcactaatgttattaaagactatgag
agagctgaaattgtatgtgaaaattgtggatgtgtcttgcaacaaaacttgtttgatgtt
gggcctgaatggagagcatttgaccatgagcaaagagttaagagaagtagagttggagct
ccaatgacatacaccattcacgataaggggttatcaacagttatcgactggagaaacaaa
gatagttatggaaaagacatctctgcaaataagagggctcaactttacagattgagaaaa
tggcaaagaagaattagggttagtgatgcatcagagaggaacttggcatttgcattatct
gaattggatagaattgcatcaaaactcggcttaccaagaaacgttagagaaaacgctgct
gtattgtataggggggctgttgaaaaaggacttattagaggaagaagtatagagggtgtc
gcagcagcagcattatatgcggcatgtagaagatgcagagtgccaagaactcttgatgag
attgctgaggcatcaagagtcgatagaaaagaaattggaaggacatacagatttttagca
agggaattaggtataaaattagccccaacaaacccaatagattacgtgccaagatttgca
tctgaattgggattacctggagaagttgagtcaaaggcaatagccatcttgcaaaaagct
gctgaaaaaggtttaacaagtggaagaggcccaactggtgttgcagcagcagcaatttac
atagcaagtgtattattaggaaatagaagaacacaaagagatgttgcagaagttgccgga
gttacagaagtaactataaggaatagatacaaagaacttaccgagcatttagatatagat
gtaacgctataa
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