Methanotorris igneus: Metig_1549
Help
Entry
Metig_1549 CDS
T01510
Name
(GenBank) translation elongation factor EF-1, subunit alpha
KO
K03231
elongation factor 1-alpha
Organism
mig
Methanotorris igneus
Pathway
mig03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Metig_1549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mig03019
]
Metig_1549
03016 Transfer RNA biogenesis [BR:
mig03016
]
Metig_1549
03012 Translation factors [BR:
mig03012
]
Metig_1549
04131 Membrane trafficking [BR:
mig04131
]
Metig_1549
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mig04147
]
Metig_1549
Messenger RNA biogenesis [BR:
mig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
Metig_1549
Transfer RNA biogenesis [BR:
mig03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
Metig_1549
Translation factors [BR:
mig03012
]
Eukaryotic type
Elongation factors
Metig_1549
Membrane trafficking [BR:
mig04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
Metig_1549
Exosome [BR:
mig04147
]
Exosomal proteins
Proteins found in most exosomes
Metig_1549
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
PduV-EutP
RsgA_GTPase
Ras
FeoB_N
Arf
Motif
Other DBs
NCBI-ProteinID:
AEF97083
UniProt:
F6BAZ6
LinkDB
All DBs
Position
1593135..1594421
Genome browser
AA seq
428 aa
AA seq
DB search
MAKQKPVLNVAFIGHVDAGKSTTIGRLLYDSGAIDPQVLEKLKREAAEKGKAGFEFAYVM
DGLKEERERGVTIDIAHKKFETPKYEITIVDCPGHRDFIKNMITGASQADAAILVVDVND
HKTGIQPQTREHMFLARTLGINQIAVAINKMDTVNYSQEAYEAMKKMLSEQLLKILGYNP
DNIDFIPVASYHGDNVVKKSDKMPWYNGPTLVEALDKFNPPEKPTNLPLRIPIQDVYSIT
GVGTVPVGRVETGILKPGDKVIFEPAGVQGEVKSIEMHHEQISQAEPGDNIGFNVRGVSK
KDIKRGDVCGHPDNPPTVAEEFTAQIVVLQHPTVITVGYTPVFHAHTAQVACTFTEILKK
LNPATGEVIEENPDFIKAGDAAIIKVRPTKPMVIENVKEIPQLGRFAIRDMGMTIAAGMA
IDVKAKNK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaaaagccagtattaaacgttgcattcattggacacgttgacgcaggtaag
tcaacaacaattggaagactcttatacgacagtggagcaattgacccacaagttttagaa
aaattaaaaagagaagctgcagaaaaaggtaaagcaggattcgagtttgcttacgttatg
gacggtttaaaagaagagagagaaagaggggttacaatcgacattgctcacaagaaattc
gaaactccaaaatacgaaattacaattgtcgactgtcctggacacagagacttcattaaa
aacatgattactggagcttcacaagcagacgctgctatattagtcgttgacgtaaacgac
cacaaaacaggtatccaaccacaaacaagagaacacatgttcttagcaagaacattaggt
atcaaccaaattgcagttgcaattaacaagatggacactgtaaactacagccaagaagct
tacgaagcaatgaaaaagatgctctcagaacaattattgaaaatcttaggatacaaccca
gacaacattgactttatcccagttgcgtcataccatggagacaacgttgttaaaaaatca
gacaaaatgccatggtacaatggaccaacattagttgaagcattagacaaattcaaccca
ccagaaaaaccaacaaacttaccattaagaatcccaatccaagacgtttactcaattaca
ggggtcggtacagttcctgttggtagagtagaaacaggtatcttgaaaccaggagacaaa
gttatattcgaaccagcaggagttcaaggagaagtcaaatccatcgaaatgcaccacgaa
caaatctcacaagcagagcctggagacaacattggtttcaacgtaagaggtgtcagtaag
aaagatattaagagaggagacgtttgtggacacccagacaacccaccaacagttgcagaa
gaattcacagcacaaatcgttgtcttacaacacccaacagtcattacagttggttacaca
cctgtcttccacgcacacacagcacaagttgcatgtacattcacagaaatcttgaagaag
ttgaacccagcaactggtgaagttatagaagaaaatccagacttcattaaagctggagat
gctgcaatcatcaaagtcagaccaacaaaaccaatggttattgaaaacgtaaaagaaatc
ccacaactcggaagattcgctatcagagatatgggtatgacaatcgcagcaggtatggca
atcgatgttaaagcaaaaaacaaataa
DBGET
integrated database retrieval system
