Methanotorris igneus: Metig_1678
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Entry
Metig_1678 CDS
T01510
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
mig
Methanotorris igneus
Brite
KEGG Orthology (KO) [BR:
mig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mig03019
]
Metig_1678
Messenger RNA biogenesis [BR:
mig03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
Metig_1678
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
DUF5814
Helicase_C
ResIII
DUF8549
SNF2-rel_dom
SecA_DEAD
DEXQc_Suv3
Gemini_AL1_M
Motif
Other DBs
NCBI-ProteinID:
AEF97210
UniProt:
F6BBT0
LinkDB
All DBs
Position
complement(1720253..1722658)
Genome browser
AA seq
801 aa
AA seq
DB search
MLIIRKPKKKKDEIEVVDLINEKKYYALLRKEGNKIRPYKCREEDKLIQPAKFMNILKNN
KILLSKDEETLRIEDFLKTNNLKYEYIELCPFCLTKGKYKELYDKYSYYGRCICLDCAIE
EVKNEVNINEEFIRKLLKRFRDVERVIEIFKTNRPLDNPELTRYDVLVGSEEDKIENYKI
DELSIPKELKEIIKERGIEELLPVQTLAVKGGLLENKDLLIMSATSSGKTLIGELAGIKN
LLEGKGKFLFLVPLVALANQKYLEFKERYEKLGLKVSLRVGMGRLSKPKEEINTDINADI
IVGTYEGIDYLIRTKKLKDVGTVVIDEIHSLNMEDRGARLDGLIGRLRELFNAQMIYLSA
TIGNPNELAKKLNARAIIYNGRPVPLERHVIFAKNEYNKLNLIREIVKREFNTISKYGYR
GQSLIFTYSRKRAEYIARFLNSKGIKADYYHGGMEYSRRRRVEDDFLNQKIMCVVTTAAL
AAGVDFPASTVILESLAMGGDWLNPSEFQQMCGRAGRKGMHDIGKVYLLVEIGKKYHAKM
EMSEDEVAFKLLNSEPEDVNVEYNEDEELEQILATITAGITNKFELDRVPLLGRNLDLDY
VLNKLGGYGMVEVIGNNVYPTKYGYATSISFLYPKDAEIIREAIKNKEEIMELIVKILPF
DNIYISPSLKNKLSRIFHINIPSRFVDALQIIKENFERVREKHLKEMLIPIILEFEEEEE
VIPKISKTIINLRMNKKTPSQISKILYEDYRIQTYSGDIYTYLENVIKLLDAIERIGNIY
NKNYAIRAKELKERIENPYQK
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgcttataattagaaaacctaagaaaaagaaggatgaaattgaggttgtagatttaatc
aacgagaaaaaatattatgccttattgagaaaagaagggaataagataaggccatataaa
tgtagagaggaagacaaattaatccaaccagcaaagttcatgaatattttaaagaacaac
aagattctcctaagcaaagatgaagagaccttaagaatagaggattttctaaaaacaaac
aatttaaaatatgaatatattgagttgtgtccattttgcttaacaaaagggaaatataaa
gaactttatgacaaatacagttactatggtaggtgtatatgcttagattgtgccatcgaa
gaagttaaaaatgaagtcaatattaacgaagagtttattagaaaacttttgaagagattt
agggacgttgaaagagtaatagaaatattcaaaacaaacagaccattagataacccagaa
ttgacaagatacgatgtattagtaggaagtgaagaggataaaatagaaaactataaaata
gatgaattaagcattcccaaagaattaaaggaaattataaaagaaaggggaatagaagaa
ctccttccagtccaaacacttgctgttaaaggtgggttattggagaataaagatctcctt
ataatgtcagccacatcttctggaaaaacactcattggcgaacttgcaggaattaaaaat
ctattagaaggtaaaggaaaatttctgtttttagtgccacttgtagcattagcaaatcaa
aagtatcttgaatttaaagagaggtatgaaaaattggggctaaaagtatctttaagggta
ggaatgggaagattaagcaaaccaaaagaagaaataaacactgacataaatgcggatatt
attgttggtacttatgagggaattgattatttaataagaactaaaaaattaaaggatgtg
gggactgttgttattgatgagattcattccctcaacatggaagatagaggagcaaggtta
gatggattgattggaagattgagagagttgtttaatgcccaaatgatttatctctctgcc
acaattggaaatccaaacgaacttgcaaaaaaactaaatgcaagggcaataatatacaat
gggagaccagtcccattagagagacacgtaatatttgcaaagaatgaatataacaagtta
aatttgattagggagattgtaaaaagagagttcaacacaatatccaaatatggctataga
gggcagagtttaattttcacctactcaagaaaaagggcagaatacatagcgaggttttta
aattcaaaaggaattaaggcagattactaccatggaggtatggagtattcaaggagaaga
agggtagaggatgattttttaaaccaaaaaatcatgtgcgttgtaacaacagctgcactt
gctgcgggggttgattttccagcatctacagtaatactcgagagtttggcgatgggaggg
gattggttaaatccatctgaattccaacagatgtgtggaagggcaggaagaaagggaatg
cacgatattggaaaggtctatttgctggttgaaatagggaagaagtatcatgcaaagatg
gaaatgagcgaggatgaagtggcatttaaactcctaaactctgagccagaagatgttaat
gttgaatacaatgaggatgaagagttagaacaaatactcgccacaataactgctggaata
acaaataaatttgaattggacagagttccgttgcttggtagaaatttggatttagattat
gttctcaataaattgggaggatatggtatggttgaagtgattggaaataatgtatatcca
acaaaatatggatatgcaacttcaatatccttcctatacccaaaagatgcagagattata
agggaagcaattaaaaataaagaggaaattatggagttaattgtgaaaattttgccattt
gacaacatctacatttccccatcactaaaaaataaactatcaaggatatttcacataaat
attccttcaagattcgttgatgcactgcagataataaaagagaactttgagagagttaga
gagaaacatttaaaggaaatgctaataccaattatcttggaatttgaggaagaggaagaa
gttattccaaaaatatcaaagaccatcataaatttgaggatgaataaaaaaacaccatca
cagatctcaaaaatactctatgaagattatagaatccaaacttacagtggggatatttac
acatacttggaaaatgtgattaaattgttggatgcaatagaaaggattggtaacatatac
aataaaaactatgcaattagagcaaaggaattaaaagagagaatagaaaatccatatcaa
aaatag
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