Microbacterium sp. BH-3-3-3: BJP65_01145
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Entry
BJP65_01145 CDS
T04827
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mih
Microbacterium sp. BH-3-3-3
Pathway
mih02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mih00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BJP65_01145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mih03021
]
BJP65_01145
Transcription machinery [BR:
mih03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BJP65_01145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
BUD22
BSP_II
Motif
Other DBs
NCBI-ProteinID:
AOX44575
LinkDB
All DBs
Position
231218..232546
Genome browser
AA seq
442 aa
AA seq
DB search
MAVTTTKTRSKSVKDAELANSEETVTASTTTTAKKAPAKKAPAKAKATPAKAKTKAKKDD
DLEEDEEVEDEVDVEVEVDDSDDTDTDAAKTATKKSDDDTDDDDESPKAPAEALPTGAIV
ISSSDEDDVPVYSAQITGATADPVKDYLKQIGKVPLLNAAEEVELAMRIEAGLFAEEKLS
NMSAAEKTNQVGLDLQWVARDGQRAKSHLLGANLRLVVSLAKRYTGRGMQFLDLIQEGNL
GLIRAVEKFDYTKGFKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQM
LQDLGREPTPEELSRELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDTEAVV
PADAVGFTMLQRQLESLLDSLSEREAGVIRMRFGLGDGQPKTLDQIGDTFGVTRERIRQI
ESKTMAKLRHPSRSQSLRDYLE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
gtggcagtcacgacgaccaagacccgctccaagagtgtgaaggacgccgagctcgcgaac
tccgaggagaccgtgacggcgtcgacgacgacgaccgcgaagaaggctcccgccaagaag
gcccccgccaaggccaaggcgacgcccgcgaaggccaagaccaaggcgaagaaagacgac
gacctcgaagaagacgaagaggtcgaagacgaggtcgatgtcgaggtcgaggtcgacgac
agcgacgacaccgacaccgacgcggccaagaccgcgacgaagaagtccgacgacgacacc
gacgacgacgacgagagcccgaaggctcccgccgaagcgctgccgaccggcgccatcgtc
atctcgtcgagcgacgaagacgacgtccccgtctactccgcgcagatcaccggcgccacc
gccgaccccgtcaaggactacctgaagcagatcggtaaagtcccactgctgaacgcggcc
gaagaggtcgagctcgcgatgcgcatcgaggcgggtctcttcgccgaagagaagctgtcg
aacatgtcggccgccgagaagaccaaccaggtcggactcgacctgcagtgggtcgctcgt
gacggtcagcgcgccaagagccacctgctgggcgccaacctgcgcctggtggtgtcgctc
gcgaagcgctacaccggtcgcggcatgcagttcctcgacctcatccaggagggcaacctg
ggcctgatccgtgcggtcgagaagttcgactacaccaagggcttcaagttctcgacctac
gccacctggtggatccgtcaggccatcacgcgcgccatggccgaccaggcccgcaccatc
cgcatcccggtgcacatggtcgaggtcatcaacaagctcgcgcgtgtccagcgtcagatg
ctgcaggacctcggtcgcgaacccacgcccgaagaactcagccgtgagctcgacatgacc
cccgagaaggtcatcgaggtgcagaagtacggccgcgagccgatctcgttgcacacgccc
ctcggtgaagacggcgacagcgagttcggtgacctcatcgaggacaccgaggccgtcgtc
cccgccgacgccgtgggcttcacgatgctgcagcgtcagctcgagtccctcctcgactcg
ctcagcgagcgtgaagcgggtgtcatccgcatgcgcttcggcctcggcgacggtcagccc
aagacgctcgaccagatcggcgacacgttcggcgtcacgcgcgagcgcatccgccagatc
gagtcgaagacgatggccaagctgcgtcacccgagccgctcgcagtcgcttcgggactac
ctcgaatga
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