Microbacterium sp. BH-3-3-3: BJP65_01240
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Entry
BJP65_01240 CDS
T04827
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mih
Microbacterium sp. BH-3-3-3
Brite
KEGG Orthology (KO) [BR:
mih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mih03016
]
BJP65_01240
Enzymes [BR:
mih01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BJP65_01240
Transfer RNA biogenesis [BR:
mih03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BJP65_01240
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
AOX44592
UniProt:
A0AAC9N873
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All DBs
Position
complement(255010..256206)
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AA seq
398 aa
AA seq
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MVEYIVIEDAAGLSSACESLAAGTGPVAVDVERASGFRYSQRAYLIQVFRRGAGVFLFDP
STIDDFAPLQAAIGDAEWVFHAASQDLPSLRERGLEPPHIFDTELGSRLLGHERVGLGAV
VEHTLGITLAKAHSAADWSTRPLPASWLEYAALDVEHLIDVRDVLVAELEEQQKTEFARQ
EFQAVLERLPKPAREDPWRRLSGLHSVRGRRSLAIARSLWQAREDFAREQDIAPGRLVPD
RALVAAVMADPATKQALAGIKEFNGRASRTQLDRWWNAIVAGREATELPADRVPSDTLPP
PRAWVDRNPDADRRLKAARPAVEERAEALHMPTENLLTPETLRRVAWTPPAELTADAVGA
ALAEWGARPWQIDQTAQVIADSFVASLNTEDDVPVADS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtggttgagtacatcgtcatcgaggatgccgcggggctgagctccgcgtgcgagagtctg
gcggcgggcacgggtcccgtggccgtcgacgtcgaacgggcgtcgggtttccgctactcg
cagcgggcctacctgatccaggtgttccgccgcggcgccggagtgttcctcttcgacccg
tccaccatcgacgacttcgcgcccctgcaagcggcgatcggcgatgcggagtgggtgttc
cacgcggcgagccaggatctcccgtcgctgcgggaacggggtctcgagcccccgcacatc
ttcgacaccgagttgggctcgcgcctgttgggtcacgagcgcgtcggcctcggggccgtg
gtggagcacacgctcggcatcacgctggccaaggcgcactcggccgccgactggtcgacg
cgtccgcttccggcatcctggctcgagtacgccgctctcgacgtcgagcacctgatcgac
gtgcgcgacgtgctggtcgccgagctcgaggagcagcagaagaccgagttcgcccgccag
gagttccaggcggtgctcgagcgtctgcccaagcccgcgcgtgaagacccgtggcgccgc
ctcagcggcctgcactcggtgcgcggtcgacgatcgctcgccatcgcccgctcgctctgg
caggcgcgcgaagacttcgcgcgggagcaggacatcgcccccgggcgactcgtacccgat
cgcgctctggtcgccgccgtgatggccgacccggcgaccaagcaggccctcgcgggcatc
aaggagttcaacggccgagcgagccggacgcagctcgaccggtggtggaacgccatcgtc
gccgggcgtgaggcgaccgagctgcccgccgaccgggtgccgagcgatacgcttccccct
ccccgcgcgtgggtcgatcgcaaccccgatgccgaccgccgtctgaaggcggcgcgtccc
gccgtcgaggagcgcgccgaagcgctgcacatgccgaccgagaacctgctcacccccgag
acgttgcgccgcgtggcgtggactccccccgccgagctcacggccgacgccgtcggcgcg
gcgctggcggagtggggtgctcgaccctggcagattgatcagaccgcacaggtgatcgcc
gatagctttgtagcttccctcaacacggaagacgacgtccccgtcgcggattcgtag
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