Microbacterium sp. BH-3-3-3: BJP65_02660
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Entry
BJP65_02660 CDS
T04827
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mih
Microbacterium sp. BH-3-3-3
Pathway
mih03030
DNA replication
mih03430
Mismatch repair
mih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BJP65_02660
03430 Mismatch repair
BJP65_02660
03440 Homologous recombination
BJP65_02660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mih03032
]
BJP65_02660
03400 DNA repair and recombination proteins [BR:
mih03400
]
BJP65_02660
Enzymes [BR:
mih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BJP65_02660
DNA replication proteins [BR:
mih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BJP65_02660
DNA repair and recombination proteins [BR:
mih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BJP65_02660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AOX44824
UniProt:
A0AAC9I8L4
LinkDB
All DBs
Position
complement(553107..556571)
Genome browser
AA seq
1154 aa
AA seq
DB search
MLDGAARIGPMVQEAAKQGMSAIAVTDHGNTFAAYEFYKTAKDAGIKPIIGIEAYVTPGT
HRSDKTRVRWGTPEQQGDDVSGSGAYTHMTLLSETTEGMHNLFRLSSKASMEGYYFKPRM
DRELLQTYGKGLIATTGCPSGEVQTRLRLGQYEAARAAAAEFQDIFGKENYFAEIMDHGL
SIERRVMSDLLKISKDLDIPLVGTNDLHYTHQHDATSHAALLCVQSGSTLDDPKRFRFDG
DGYYVKSPAEMRQVFRDNPEACDNTLLIAERCEVEFNTSANYMPRFPVPAGETEDSWMIK
EVENGLHDRYPGGIPDAVRKQAEYETGVILQMGFPGYFLVVADFINWAKDHGIRVGPGRG
SGAGSMVAYAMKITDLDPLQHGLIFERFLNPDRVSMPDFDVDFDDRRRGEVIQYVTEKYG
DERVAQIVTYGTIKAKQALKDAGRVLGFPFSMGDRLTKAMPPAVMGKDMPLDGMFNPEHP
RYKEASEFRTLIETDAEAKTVFDTALGLENLKRQWGVHAAGVIMSSEPLIDIIPIMRREQ
DGQIVTQFDYPACESLGLIKMDFLGLRNLTIINDALDNIEANRGHPLVLEDLELDDVASY
ELLARGDTLGVFQLDGGPMRSLLRLMRPDNFEDISAVLALYRPGPMGVNSHINYALRKNR
QQEIEPIHPELEEPLADILDTTYGLIVYQEQVMAVAQRVAGYTLGQADLLRRAMGKKKKS
ELDKQKETFFGGMTERGFGDAAQQTLWKVLESFADYAFNKAHTAAYGLVSYWTAYLKAHY
PAEYMAALLTSVGDSKDKMAVYLNECRRMGIKVLPPDVNESIRFFAAVGEDIRFGLGAIR
NVGTNVVDGIVSARQDAKYTSFHDFLSKVPVHVANKRTVESLIKAGAFDTLGSTRRSLIE
VHEDACEGAVLDKRREANGEVGFDFDSLWDEPQQVQKVPERPEWTKKDKLAFEREMLGLY
VSDHPLAGLEVPLAKHASTSIHDLLASEDVQDGDQVTVAGLLTSVQHRVAKQSGNPYGMV
TIEDFNGEVTVMFMGKTYAEFSPALVADGIMVIRGRVSRRDDGLNLHAQSAFAPDLEGLD
ETGGLTLMVPEQRASEALVGELAQMLRRHSGSTEVVLKLHKGSTAKVFEVPMPVRVTADL
FGELKGLLGPNCLG
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacggtgcggcccgcatcgggccgatggtccaagaagcggcgaagcagggcatg
tcggccatcgccgtcaccgaccacggcaacaccttcgcggcctacgagttctacaagacc
gcgaaagacgccggcatcaagccgatcatcggcatcgaggcgtacgtcacgccgggcacc
catcgttccgacaagacccgcgtgcgctggggcacccccgagcagcagggcgacgacgtc
tcgggctccggtgcgtacacgcacatgacgctgctgtccgagaccaccgagggcatgcac
aacctgttccggttgtcgtccaaggcgagcatggagggctactacttcaagccccgcatg
gaccgcgagctgctgcagacctacggcaaggggctcatcgccaccaccggatgcccctcg
ggcgaggtgcagacgcgtcttcgactcgggcagtacgaggccgcgcgcgccgcggcggcc
gagttccaggacatcttcggcaaagagaactacttcgccgagatcatggaccacggactc
tcgatcgagcgtcgcgtcatgagcgatctgctcaagatctccaaagacctcgacatcccc
ctggtcggcaccaatgacctccactacacccaccagcacgacgccacgagtcacgcggcg
ctgctgtgcgtgcagtcgggatcgacgctcgacgatcccaagcgcttccgcttcgacggc
gacgggtactacgtcaagtcgcccgccgagatgcggcaggtgttccgcgacaaccccgaa
gcctgcgacaacacgctgctcatcgccgagcggtgcgaggtcgagttcaacacctcggcc
aactacatgccgcgcttcccggtccccgcgggcgagaccgaagacagctggatgatcaaa
gaggtcgagaacggcctccacgaccgctacccgggcggtatccccgacgccgtgcgcaag
caggccgagtacgagaccggcgtcatcctgcagatggggttcccgggctacttcctcgtc
gtcgcggacttcatcaactgggccaaggaccacggcatccgcgtcggccccggccgtgga
tccggcgcgggctccatggtcgcctatgcgatgaagatcaccgacctggacccgctgcag
cacggcctcatcttcgagcgcttcctcaaccccgaccgcgtctcgatgcccgacttcgac
gtcgacttcgacgaccgtcgtcgtggcgaggtgatccagtacgtcaccgagaagtacggc
gacgagcgcgtcgcgcagatcgtcacgtacggcacgatcaaggccaagcaggcgctgaaa
gacgccgggcgcgtgctcggtttccccttcagcatgggcgaccggctcaccaaggccatg
ccccccgccgtgatgggcaaagacatgccgctcgacggcatgttcaaccccgagcacccg
cgatacaaagaggcgagcgagttccgcacgctgatcgagaccgacgccgaggcgaagacg
gtcttcgacaccgccctgggcctcgagaacctgaagcgccagtggggcgtgcacgcggcc
ggcgtcatcatgtcgagcgagccgctgatcgacatcatcccgatcatgcgccgcgagcag
gacggccagatcgtcacgcagttcgactaccccgcgtgcgagtcgctcggcctgatcaag
atggacttcctggggctgcgcaacctcaccatcatcaacgacgccctcgacaacatcgag
gccaaccgcgggcaccccctcgtgctcgaggacctcgaactcgacgacgtggcctcgtac
gagctgctcgcccgcggcgacacgctcggcgtgttccagctcgacggtggtcccatgcgc
tcgctcctgcggctcatgcgccccgacaacttcgaggacatctcggcggtgctcgcgctg
taccgccccggccccatgggcgtgaactcgcacatcaactacgccctgcgaaagaaccgg
cagcaagagatcgagccgatccaccccgaactcgaggagcccctcgccgacatcctcgac
acgacgtacgggctgatcgtctatcaggagcaggtgatggccgtcgcgcagcgcgtggcc
gggtacaccctgggccaggccgacctgctgcgtcgcgcgatgggcaagaagaagaagagc
gagctcgacaagcagaaagagacgttcttcggtggcatgaccgagcgcgggttcggcgac
gccgcgcagcagaccctgtggaaggtgctcgagtcgttcgccgactacgccttcaacaag
gcgcacaccgccgcctacggtctcgtgtcgtactggacggcctacctcaaggcgcactac
ccggccgagtacatggccgcgctgctgacgagcgtcggcgactcgaaagacaagatggcg
gtgtacctcaacgagtgccgtcgcatgggcatcaaggttctgccgcccgacgtcaacgag
tcgatccggttcttcgcggccgtcggcgaagacatccgcttcggcctgggcgcgatccgc
aacgtcggcaccaacgtcgtcgacggcatcgtctcggcgcgccaagacgccaagtacacc
tcgttccacgacttcctgtccaaggtgcccgtgcacgtggcgaacaagcgcaccgtcgag
tcgctcatcaaggccggggccttcgacacgctcgggtcgacgcgacggtcgctcatcgag
gtgcacgaggacgcctgcgagggcgccgtgctcgacaagcggcgagaagccaacggcgag
gtcggcttcgacttcgactcgctctgggacgaaccgcagcaggtgcagaaggttcccgag
cggccggaatggacgaagaaggacaagctcgccttcgagcgcgagatgctcggcctgtat
gtgtccgatcacccgctcgccgggctcgaggtgccgttggccaagcacgcgtcgacctcg
atccacgacctgctggcctccgaagacgtccaggacggcgaccaggtcaccgtcgcgggt
ctgctcacgagcgtgcagcaccgcgtcgcgaagcagagcggcaacccctacggcatggtc
accatcgaggacttcaacggtgaggtgaccgtgatgttcatgggcaagacgtacgccgag
ttctcgccggcgctcgtggccgacggcatcatggtcatccgagggcgcgtatcgcgacgc
gacgacggtctcaacctgcacgcccagagcgccttcgcgcccgatctcgaaggtctcgac
gagaccggcgggctcacgctgatggtgcccgagcagcgggcgagcgaggcgctggtcgga
gaactggcgcagatgctgcgtcgccactcaggcagtacagaggtcgttctcaaactccac
aagggcagcaccgccaaggtcttcgaggtgccgatgccggtgcgggtgaccgccgacctg
ttcggggagctcaagggtctgctcggccccaactgcctcggctga
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