Microbacterium sp. BH-3-3-3: BJP65_03590
Help
Entry
BJP65_03590 CDS
T04827
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mih
Microbacterium sp. BH-3-3-3
Pathway
mih03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BJP65_03590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mih03019
]
BJP65_03590
03016 Transfer RNA biogenesis [BR:
mih03016
]
BJP65_03590
Enzymes [BR:
mih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BJP65_03590
Messenger RNA biogenesis [BR:
mih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BJP65_03590
Transfer RNA biogenesis [BR:
mih03016
]
Prokaryotic type
tRNA degradation factors
BJP65_03590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_KhpA-B
KH_5
Motif
Other DBs
NCBI-ProteinID:
AOX44990
UniProt:
A0AAC9I9U5
LinkDB
All DBs
Position
complement(752984..755281)
Genome browser
AA seq
765 aa
AA seq
DB search
MEGPEITAAEAVLDNGRFGTRTIRFETGRLAQQAQGAVAAYLDEETMLLSATSAGKHPRE
GFDFFPLTVDVEERSYAAGKIPGSFFRREGRPSTEAILVCRLIDRPLRPSFVEGLRNEVQ
IVVTVLSIAPGEFYDALAINAASLSTQISGLPFSGPIAGVRLALIPGHGENADQWVAFPT
VTQLEEAVFDLIVAGRVLDDGDVAIMMVEAEATEGSWNMIKGGATKPNEQVVAEGLEAAK
PFLRQLVDAQNEVARTAAKEIQSFPVFPAYSQQTYDFVAGRAYDRLVPVYQIADKQERQN
ADDEIKTSVKAELVAAVESGELPAVATLEFSAAYKSVTKTIVRGRILAEGVRMDGRGLAD
IRPLDAEVQVIPRVHGSAIFQRGETQILGVTTLNMLKMEQQIDSLSPITSKRYLHHYNFP
PYSTGETGRVGSPKRREIGHGFLAERALVPVLPSREEFPYAIRQVSEALGSNGSTSMGSV
CASTLSLLNAGVPLRAPVAGIAMGLVTDQVDGQTRYAALTDILGAEDALGDMDFKVAGTS
EFITAIQLDTKLDGIPSSVLAAALTQAKEARLTILNVLNSAIDAPDEMAPTAPRVISVQI
PVDKIGELIGPKGKTINSIQDETGAQISIEDDGTVYIGATDGPSAEAARAQVNAIANPTN
PEVGEQFLGTVVKIATFGAFVSLLPGKDGLLHVSEVRKLAGGKRVENVEDVLSVGRKILV
RITKIDDRGKLSLEPVVDEAADATEPADTQSSAAASEGPEAPAEG
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
ttggaaggtccagaaatcaccgccgctgaagccgttctcgacaacggccgtttcggcacc
cgcaccatccgcttcgagaccggacgcctcgctcagcaggcccagggcgctgttgccgcc
tacctcgacgaagagaccatgctcctgtcggccaccagcgccggcaagcacccgcgtgaa
ggcttcgacttcttcccgctgaccgtcgacgtcgaagagcgttcgtacgccgccggcaag
atccccggctcgttcttccgccgcgagggtcgcccctcgaccgaggccattctcgtctgc
cgcctcatcgaccgcccgctgcgcccctcgttcgtcgagggcctgcgcaacgaggtccag
atcgtcgtcaccgtgctgtcgatcgcacccggcgagttctacgacgccctcgcgatcaac
gccgcgtcgctgtcgacccagatctcgggtctgcccttctcgggtcccatcgccggtgtg
cgcctcgcgctcatccccggccacggtgagaacgccgaccagtgggtcgcgttcccgacc
gtcacgcagctcgaagaggccgtcttcgacctcatcgtcgcgggccgcgtgctcgacgac
ggcgacgtcgccatcatgatggtggaggccgaggccaccgagggcagctggaacatgatc
aagggcggcgccaccaagcccaacgagcaggtcgtggccgaaggcctcgaagcggccaag
ccgttcctgcgccagctggtcgacgcgcagaacgaggtcgcccgcacggcggccaaggag
atccagtcgttccccgtcttcccggcctacagccagcagacgtacgacttcgtcgccggt
cgcgcctacgaccgcctcgtgccggtgtaccagatcgccgacaagcaggagcgtcagaac
gccgacgacgagatcaagacctcggtcaaggccgagctcgtcgccgccgtcgagtcgggt
gagctgcccgccgtcgcgacgctcgagttcagcgccgcgtacaagtcggtcaccaagacg
atcgtccgcggtcgcatcctcgccgagggcgtccgcatggacggccgtggtctggccgac
atccgtccgctcgacgccgaggtgcaggtcatcccgcgcgttcacggctcggcgatcttc
cagcgcggcgagacccagatcctgggcgtcaccacgctgaacatgctcaagatggagcag
cagatcgactcgctgtcgcccatcacgagcaagcgctacctgcaccactacaacttcccg
ccgtactcgaccggtgagaccggtcgcgtgggcagccccaagcgtcgcgagatcgggcac
ggcttcctggccgagcgcgcgctcgtgcccgtgctgcccagccgcgaggagttcccgtac
gcgatccgtcaggtgtccgaggccctcgggtccaacggctccacctcgatgggctccgtc
tgcgcctcgaccctgtcgctgctgaacgcgggtgtgccgctgcgcgctcccgtcgccggt
atcgccatgggcctggtcaccgaccaggtcgacggacagacgcgctacgccgccctgacc
gacatcctcggcgccgaagacgccctcggcgacatggacttcaaggtcgcgggtacgtcg
gagttcatcacggcgatccagctcgacaccaagctcgacggcatcccgtcgtcggtgctc
gccgctgccctcacccaggcgaaggaggctcgtctgacgatcctcaacgtcctgaactcg
gccatcgacgcccccgacgagatggcgcccaccgcgccccgcgtcatcagcgttcagatc
ccggtcgacaagatcggtgagctcatcggacccaagggcaagacgatcaactccatccag
gacgagaccggcgcccagatctcgatcgaagacgacggcaccgtgtacatcggcgcgacc
gacggcccctcggccgaggctgcccgtgcgcaggtgaacgcgatcgccaacccgaccaac
cccgaggtcggcgagcagttcctgggcacggtcgtcaagatcgcgaccttcggtgcgttc
gtctcgctcctgcccggcaaggacggactgctgcacgtcagcgaggtccgcaagctcgcc
ggtggcaagcgcgtcgagaacgtcgaagacgtgctgtcggtcggtcgcaagatcctcgtg
cgcatcacgaagatcgacgaccgcggcaagctgtcgctcgagccggtcgtcgacgaggcc
gctgacgcgaccgagccggccgacacgcagagctcggccgccgcgagcgagggtcccgag
gctcccgccgaaggctga
DBGET
integrated database retrieval system
