Microbacterium sp. BH-3-3-3: BJP65_04305
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Entry
BJP65_04305 CDS
T04827
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mih
Microbacterium sp. BH-3-3-3
Pathway
mih03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BJP65_04305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mih03400
]
BJP65_04305
Enzymes [BR:
mih01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
BJP65_04305
DNA repair and recombination proteins [BR:
mih03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BJP65_04305
Prokaryotic type
BJP65_04305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AOX45119
UniProt:
A0AAC9I9P0
LinkDB
All DBs
Position
complement(906471..907157)
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AA seq
228 aa
AA seq
DB search
MSGKTLAQLADAGLIDASWVTPLALVADDIAALGERLRTEGQPYLPAGDLVLRAFRTPID
AVRVLIVGQDPYPTPGHPIGLSFAVDPHVRPVPRSLSNIYRELSDDLGIAPAPHGDLSAW
GAQGVMLLNRVLTVAPGSPASHRGWGWERVTDHAIRSLVAREASLVAVLWGKDAMNLAPL
LGDTAIVSSPHPSPLSASRGFFGSKPFSRVNTLLEEQGADPVDWRLPA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggcaagactctcgcgcagctcgccgatgccggcctgatcgacgcgtcgtgggtg
acgcccctcgccctcgtcgccgacgacatcgcggcgctcggggagcgcctgcgcaccgag
gggcagccgtacctccccgccggtgacctcgtgctgcgtgcgttccgcacgccgatcgac
gcggtgcgcgtgctgatcgtcggccaggatccgtaccccaccccggggcacccgatcggc
ctgtcgttcgcagtcgacccgcacgtgcggcccgtgccgcggagcctgtcgaacatctac
cgcgagctctccgacgacctggggatcgcccccgcgccgcacggcgacctctcggcctgg
ggcgcgcagggcgtcatgctgctgaaccgtgtgctcaccgtggcgccgggctccccggca
tcccatcgggggtgggggtgggagcgcgtgaccgaccacgccatccgcagcctcgtcgcc
cgcgaggcttcgctggtcgcggtgctgtgggggaaggatgccatgaacctggcccccctg
ctcggtgacaccgccatcgtgtcgtcgccgcatccgtcgcccctgtcggccagccggggg
ttcttcggctcgaagccgttctcgcgggtcaacaccctgctcgaggagcagggcgcggac
cccgtcgattggcgtctcccggcctga
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